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Targeted Data Fusion for Region-Specific Survival Effects in the AMP HIV Prevention Trials

AMP 艾滋病预防试验中地区特异性生存效应的定向数据融合

The Antibody Mediated Prevention (AMP) trials opened a new scientific frontier by showing that passively administered monoclonal broadly neutralizing antibodies (bnAbs) could prevent HIV-1 acquisition. Conducted across multiple geographic regions, including the United States, Brazil, Peru, Switzerland, and sub-Saharan Africa, the AMP trials revealed substantial regional heterogeneity in treatment efficacy. These differences, together with privacy and regulatory limits on…

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Targeted maximum likelihood estimation of vaccine effectiveness and immune correlates in test-negative design studies with missing data

暴露数据缺失的检测阴性设计中疫苗有效性与免疫相关指标的目标最大似然估计

The test-negative design (TND) is a resource-efficient observational study design that can assess vaccine effectiveness and exposure-proximal immune correlates of disease. The TND enrolls symptomatic individuals seeking diagnostic testing and compares case status by an exposure variable, such as vaccination status or immune marker level, that is measured at testing. While the TND reduces confounding by healthcare-seeking behavior, other sources of confounding may remain. TND…

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Inference on Variable Importance for Treatment Effect Heterogeneity: Shapley Values and Beyond

处理效应异质性的变量重要性推断:Shapley 值及其拓展

We provide an inferential framework to assess variable importance for heterogeneous treatment effects. This assessment is especially useful in high-risk domains such as medicine, where decision makers hesitate to rely on black-box treatment recommendation algorithms. The variable importance measures we consider are local in that they may differ across individuals, while the inference is global in that it tests whether a given variable is important for any individual. Our…

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Identifying and Estimating Causal Direct Effects Under Unmeasured Confounding

未测量混杂下因果直接效应的识别与估计

Causal mediation analysis provides techniques for defining and estimating effects that may be endowed with mechanistic interpretations. With many scientific investigations seeking to address mechanistic questions, causal direct and indirect effects have garnered much attention. The natural direct and indirect effects, the most widely used among such causal mediation estimands, are limited in their practical utility due to stringent identification requirements. Accordingly,…

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Proximal Causal Inference for Modified Treatment Policies

修改处理政策的近端因果推断

The proximal causal inference framework enables the identification and estimation of causal effects in the presence of unmeasured confounding by leveraging two disjoint sets of observed strong proxies: negative control treatments and negative control outcomes. In the point exposure setting, this framework has primarily been applied to estimands comparing counterfactual outcomes under a static fixed intervention or, possibly randomized, regime that depends on baseline…

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Debiasing hazard-based, time-varying vaccine effects using vaccine-irrelevant infections: An observational extension of a pivotal Phase 3 COVID-19 vaccine efficacy trial

利用疫苗无关感染去偏随时间变化的风险率型疫苗效应

Understanding how vaccine effectiveness (VE) changes over time can provide evidence-based guidance for public health decision making. While commonly reported by practitioners, time-varying VE estimates obtained using Cox regression are vul- nerable to hidden biases. To address these limitations, we describe how to leverage vaccine-irrelevant infections to identify hazard-based, time-varying VE in the pres- ence of unmeasured confounding and selection bias. We articulate…

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On the Role of Surrogates in Conformal Inference of Individual Causal Effects

替代指标在个体因果效应共形推断中的作用

Learning the Individual Treatment Effect (ITE) is essential for personalized decision-making, yet causal inference has traditionally focused on aggregated treatment effects. While integrating conformal prediction with causal inference can provide valid uncertainty quantification for ITEs, the resulting prediction intervals are often excessively wide, limiting their practical utility. To address this limitation, we introduce \underline{S}urrogate-assisted…

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A class of nonparametric methods for evaluating the effect of continuous treatments on survival outcomes

评估连续处理对生存结局影响的一类非参数方法

In randomized trials and observational studies, it is often necessary to evaluate the extent to which an intervention affects a time-to-event outcome, which is only partially observed due to right censoring. For instance, in infectious disease studies, it is frequently of interest to characterize the relationship between risk of acquisition of infection with a pathogen and a biomarker previously measuring for an immune response against that pathogen induced by prior…

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A Surrogate Endpoint Based Provisional Approval Causal Roadmap

基于替代终点的临时批准因果路线图

For many rare diseases with no approved preventive interventions, promising interventions exist, yet it has been difficult to conduct a pivotal phase 3 trial that could provide direct evidence demonstrating a beneficial effect on the target disease outcome. When a promising putative surrogate endpoint(s) for the target outcome is available, surrogate-based provisional approval of an intervention may be pursued. We apply the Causal Roadmap rubric to define a surrogate…

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Assessment of Immune Correlates of Protection via Controlled Vaccine Efficacy and Controlled Risk

通过受控疫苗效力与受控风险评估免疫保护相关指标

Immune correlates of protection (CoPs) are immunologic biomarkers accepted as a surrogate for an infectious disease clinical endpoint and thus can be used for traditional or provisional vaccine approval. To study CoPs in randomized, placebo-controlled trials, correlates of risk (CoRs) are first assessed in vaccine recipients. This analysis does not assess causation, as a CoR may fail to be a CoP. We propose a causal CoP analysis that estimates the controlled vaccine efficacy…

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