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Partially Linear Single-Index Models and Functional Principal Component Analysis of Spatially and Temporally Indexed Point Processes

时空点过程的部分线性单指标模型与函数主成分分析

We model spatially and temporally indexed point process data as a multi-level log-Gaussian Cox process where the log intensity function depends on a partially linear single-index structure of spatio-temporal covariates and three latent functional random effects representing the spatial and temporal random effects as well as their interactions. We assume that the latent functional effects are Gaussian processes with Karhunen-Loève representations, and model the unknown link…

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Bias-Correction and Test for Mark-Point Dependence with Replicated Marked Point Processes

重复标记点过程中的标记与点依赖:偏差校正及检验

Mark-point dependence plays a critical role in research problems that can be fitted into the general framework of marked point processes. In this work, we focus on adjusting for mark-point dependence when estimating the mean and covariance functions of the mark process, given independent replicates of the marked point process. We assume that the mark process is a Gaussian process and the point process is a log-Gaussian Cox process, where the mark-point dependence is…

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Crop Yield Prediction Using Bayesian Spatially Varying Coefficient Models with Functional Predictors

利用函数型预测变量的贝叶斯空间变系数模型预测作物产量

Reliable prediction for crop yield is crucial for economic planning, food security monitoring, and agricultural risk management. This study aims to develop a crop yield forecasting model at large spatial scales using meteorological variables closely related to crop growth. The influence of climate patterns on agricultural productivity can be spatially inhomogeneous due to local soil and environmental conditions. We propose a Bayesian spatially varying functional model…

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Unified Principal Component Analysis for Sparse and Dense Functional Data under Spatial Dependency

空间相关稀疏与稠密函数型数据的统一主成分分析

We consider spatially dependent functional data collected under a geostatistics setting, where locations are sampled from a spatial point process. The functional response is the sum of a spatially dependent functional effect and a spatially independent functional nugget effect. Observations on each function are made on discrete time points and contaminated with measurement errors. Under the assumption of spatial stationarity and isotropy, we propose a tensor product spline…

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Predictive functional linear models with diverging number of semiparametric single-index interactions

具有递增半参数单指标交互项的预测型函数线性模型

When predicting crop yield using both functional and multivariate predictors, the prediction performances benefit from the inclusion of the interactions between the two sets of predictors. We assume the interaction depends on a nonparametric, single-index structure of the multivariate predictor and reduce each functional predictor’s dimension using functional principal component analysis (FPCA). Allowing the number of FPCA scores to diverge to infinity, we consider a…

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Partially Linear Functional Additive Models for Multivariate Functional Data

多元函数型数据的部分线性函数型可加模型

Raymond K. W. Wonga, Yehua Lib* http://orcid.org/0000-0002-5945-378X & Zhengyuan Zhuca Department of Statistics, Texas A&M University, College Station, TXb Department of Statistics, University of California, Riverside, CAc Department of Statistics & Statistical Laboratory, Iowa State University, Ames, IACONTACT Yehua Li yehuali@ucr.edu Department of Statistics, University of California, Riverside, CA 92521Color versions of one or more of the figures in the article can be…

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Nested Hierarchical Functional Data Modeling and Inference for the Analysis of Functional Plant Phenotypes

植物功能表型分析的嵌套分层函数数据建模与推断

In a plant science Root Image Study, the process of seedling roots bending in response to gravity is recorded using digital cameras, and the bending rates are modeled as functional plant phenotype data. The functional phenotypes are collected from seeds representing a large variety of genotypes and have a three-level nested hierarchical structure, with seeds nested in groups nested in genotypes. The seeds are imaged on different days of the lunar cycle, and an important…

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Unified Empirical Likelihood Ratio Tests for Functional Concurrent Linear Models and the Phase Transition from Sparse to Dense Functional Data

函数型同期线性模型的统一经验似然比检验及稀疏到稠密数据的相变

Summary We consider the problem of testing functional constraints in a class of functional concurrent linear models where both the predictors and the response are functional data measured at discrete time points. We propose test procedures based on the empirical likelihood with bias-corrected estimating equations to conduct both pointwise and simultaneous inferences. The asymptotic distributions of the test statistics are derived under the null and local alternative…

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Generalized Quasi-Likelihood Ratio Tests for Semiparametric Analysis of Covariance Models in Longitudinal Data

纵向数据半参数协方差分析模型的广义准似然比检验

We model generalized longitudinal data from multiple treatment groups by a class of semiparametric analysis of covariance models, which take into account the parametric effects of time dependent covariates and the nonparametric time effects. In these models, the treatment effects are represented by nonparametric functions of time and we propose a generalized quasi-likelihood ratio test procedure to test if these functions are identical. Our estimation procedure is based on…

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Functional Principal Component Analysis of Spatiotemporal Point Processes With Applications in Disease Surveillance

时空点过程的函数主成分分析及疾病监测应用

In disease surveillance applications, the disease events are modeled by spatio-temporal point processes. We propose a new class of semiparametric generalized linear mixed model for such data, where the event rate is related to some known risk factors and some unknown latent random effects. We model the latent spatio-temporal process as spatially correlated functional data, and propose Poisson maximum likelihood and composite likelihood methods based on spline approximations…

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Selecting the Number of Principal Components in Functional Data

函数型数据中主成分数量的选择

Functional principal component analysis (FPCA) has become the most widely used dimension reduction tool for functional data analysis. We consider functional data measured at random, subject-specific time points, contaminated with measurement error, allowing for both sparse and dense functional data, and propose novel information criteria to select the number of principal component in such data. We propose a Bayesian information criterion based on marginal modeling that can…

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Cocaine Dependence Treatment Data: Methods for Measurement Error Problems With Predictors Derived From Stationary Stochastic Processes

平稳随机过程衍生预测变量的测量误差校正:可卡因治疗数据应用

In a cocaine dependence treatment study, we use linear and nonlinear regression models to model posttreatment cocaine craving scores and first cocaine relapse time. A subset of the covariates are summary statistics derived from baseline daily cocaine use trajectories, such as baseline cocaine use frequency and average daily use amount. These summary statistics are subject to estimation error and can therefore cause biased estimators for the regression coefficients. Unlike…

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Uniform convergence rates for nonparametric regression and principal component analysis in functional/longitudinal data

函数型与纵向数据中非参数回归和主成分分析的一致收敛速率

We consider nonparametric estimation of the mean and covariance functions for functional/longitudinal data. Strong uniform convergence rates are developed for estimators that are local-linear smoothers. Our results are obtained in a unified framework in which the number of observations within each curve/cluster can be of any rate relative to the sample size. We show that the convergence rates for the procedures depend on both the number of sample curves and the number of…

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Deciding the dimension of effective dimension reduction space for functional and high-dimensional data

函数型与高维数据有效降维空间的维数判定

In this paper, we consider regression models with a Hilbert-space-valued predictor and a scalar response, where the response depends on the predictor only through a finite number of projections. The linear subspace spanned by these projections is called the effective dimension reduction (EDR) space. To determine the dimensionality of the EDR space, we focus on the leading principal component scores of the predictor, and propose two sequential χ2 testing procedures under the…

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Generalized Functional Linear Models With Semiparametric Single-Index Interactions

含半参数单指标交互的广义函数型线性模型

We introduce a new class of functional generalized linear models, where the response is a scalar and some of the covariates are functional. We assume that the response depends on multiple covariates, a finite number of latent features in the functional predictor, and interaction between the two. To achieve parsimony, the interaction between the multiple covariates and the functional predictor is modeled semiparametrically with a single-index structure. We propose a two step…

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Nonparametric estimation of correlation functions in longitudinal and spatial data, with application to colon carcinogenesis experiments

纵向与空间数据相关函数的非参数估计及结肠致癌实验应用

In longitudinal and spatial studies, observations often demonstrate strong correlations that are stationary in time or distance lags, and the times or locations of these data being sampled may not be homogeneous. We propose a nonparametric estimator of the correlation function in such data, using kernel methods. We develop a pointwise asymptotic normal distribution for the proposed estimator, when the number of subjects is fixed and the number of vectors or functions within…

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