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Cross-Validation: What Does It Estimate and How Well Does It Do It?

交叉验证估计什么,又能估计得多准确?

Cross-validation is a widely used technique to estimate prediction error, but its behavior is complex and not fully understood. Ideally, one would like to think that cross-validation estimates the prediction error for the model at hand, fit to the training data. We prove that this is not the case for the linear model fit by ordinary least squares; rather it estimates the average prediction error of models fit on other unseen training sets drawn from the same population. We…

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Prediction and Outlier Detection in Classification Problems

分类问题中的预测与离群点检测

Abstract We consider the multi-class classification problem when the training data and the out-of-sample test data may have different distributions and propose a method called BCOPS (balanced and conformal optimized prediction sets). BCOPS constructs a prediction set C(x) as a subset of class labels, possibly empty. It tries to optimize the out-of-sample performance, aiming to include the correct class and to detect outliers x as often as possible. BCOPS returns no…

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Main Effects and Interactions in Mixed and Incomplete Data Frames

混合与不完整数据表中的主效应和交互作用

A mixed data frame (MDF) is a table collecting categorical, numerical, and count observations. The use of MDF is widespread in statistics and the applications are numerous from abundance data in ecology to recommender systems. In many cases, an MDF exhibits simultaneously main effects, such as row, column, or group effects and interactions, for which a low-rank model has often been suggested. Although the literature on low-rank approximations is very substantial, with few…

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A General Framework for Estimation and Inference From Clusters of Features

基于特征簇进行估计与推断的一般框架

Applied statistical problems often come with prespecified groupings to predictors. It is natural to test for the presence of simultaneous group-wide signal for groups in isolation, or for multiple groups together. Current tests for the presence of such signals include the classical F-test or a t-test on unsupervised group prototypes (either group centroids or first principal components). In this article, we propose test statistics that aim for power improvements over these…

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Selecting the number of principal components: Estimation of the true rank of a noisy matrix

主成分数量选择:含噪矩阵真实秩的估计

Principal component analysis (PCA) is a well-known tool in multivariate statistics. One significant challenge in using PCA is the choice of the number of principal components. In order to address this challenge, we propose distribution-based methods with exact type 1 error controls for hypothesis testing and construction of confidence intervals for signals in a noisy matrix with finite samples. Assuming Gaussian noise, we derive exact type 1 error controls based on the…

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Exact Post-Selection Inference for Sequential Regression Procedures

序贯回归程序的精确选择后推断

We propose new inference tools for forward stepwise regression, least angle regression, and the lasso. Assuming a Gaussian model for the observation vector y, we first describe a general scheme to perform valid inference after any selection event that can be characterized as y falling into a polyhedral set. This framework allows us to derive conditional (post-selection) hypothesis tests at any step of forward stepwise or least angle regression, or any step along the lasso…

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Sequential Selection Procedures and False Discovery Rate Control

序贯选择程序与错误发现率控制

Summary We consider a multiple-hypothesis testing setting where the hypotheses are ordered and one is only permitted to reject an initial contiguous block H1,…,Hk of hypotheses. A rejection rule in this setting amounts to a procedure for choosing the stopping point k. This setting is inspired by the sequential nature of many model selection problems, where choosing a stopping point or a model is equivalent to rejecting all hypotheses up to that point and none thereafter. We…

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A Permutation Approach to Testing Interactions for Binary Response by Comparing Correlations Between Classes

通过类别间相关性比较检验二元响应交互作用的置换方法

To date testing interactions in high dimensions is a challenging task. Existing methods often have issues with sensitivity to modeling assumptions and heavily asymptotic nominal p-values. To help alleviate these issues, we propose a permutation-based method for testing marginal interactions with a binary response. Our method searches for pairwise correlations that differ between classes. In this article, we compare our method on real and simulated data to the standard…

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A Simple Method for Estimating Interactions Between a Treatment and a Large Number of Covariates

估计处理与大量协变量交互作用的简便方法

We consider a setting in which we have a treatment and a potentially large number of covariates for a set of observations, and wish to model their relationship with an outcome of interest. We propose a simple method for modeling interactions between the treatment and covariates. The idea is to modify the covariate in a simple way, and then fit a standard model using the modified covariates and no main effects. We show that coupled with an efficiency augmentation procedure,…

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Rejoinder: “A significance test for the lasso”

对《lasso 的显著性检验》讨论的回复

We would like to thank the Editors and referees for their considerable efforts that improved our paper, and all of the discussants for their feedback, and their thoughtful and stimulating comments.Linear models are central in applied statistics, and inference for adaptive linear modeling is an important active area of research.Our paper is clearly not the last word on the subject.Several of the discussants introduce novel proposals for this problem; in fact, many of the…

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A significance test for the lasso

lasso的显著性检验

In the sparse linear regression setting, we consider testing the significance of the predictor variable that enters the current lasso model, in the sequence of models visited along the lasso solution path. We propose a simple test statistic based on lasso fitted values, called the covariance test statistic, and show that when the true model is linear, this statistic has an $\operatorname{Exp}(1)$ asymptotic distribution under the null hypothesis (the null being that all…

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A lasso for hierarchical interactions

满足交互项层级约束的 lasso

We add a set of convex constraints to the lasso to produce sparse interaction models that honor the hierarchy restriction that an interaction only be included in a model if one or both variables are marginally important. We give a precise characterization of the effect of this hierarchy constraint, prove that hierarchy holds with probability one and derive an unbiased estimate for the degrees of freedom of our estimator. A bound on this estimate reveals the amount of fitting…

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Inference with Transposable Data: Modelling the Effects of Row and Column Correlations

可转置数据的推断:行列相关性的建模

Summary We consider the problem of large-scale inference on the row or column variables of data in the form of a matrix. Many of these data matrices are transposable meaning that neither the row variables nor the column variables can be considered independent instances. An example of this scenario is detecting significant genes in microarrays when the samples may be dependent because of latent variables or unknown batch effects. By modelling this matrix data by using the…

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Strong Rules for Discarding Predictors in Lasso-Type Problems

Lasso类问题中剔除预测变量的强规则

Summary We consider rules for discarding predictors in lasso regression and related problems, for computational efficiency. El Ghaoui and his colleagues have proposed ‘SAFE’ rules, based on univariate inner products between each predictor and the outcome, which guarantee that a coefficient will be 0 in the solution vector. This provides a reduction in the number of variables that need to be entered into the optimization. We propose strong rules that are very simple and yet…

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Hierarchical Clustering With Prototypes via Minimax Linkage

通过极小极大连接实现带原型的层次聚类

Agglomerative hierarchical clustering is a popular class of methods for understanding the structure of a dataset. The nature of the clustering depends on the choice of linkage—that is, on how one measures the distance between clusters. In this article we investigate minimax linkage, a recently introduced but little-studied linkage. Minimax linkage is unique in naturally associating a prototype chosen from the original dataset with every interior node of the dendrogram. These…

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Regression Shrinkage and Selection via The Lasso: A Retrospective

通过 Lasso 进行回归收缩与选择:回顾

Summary In the paper I give a brief review of the basic idea and some history and then discuss some developments since the original paper on regression shrinkage and selection via the lasso.

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A Framework for Feature Selection in Clustering

聚类中的特征选择框架

We consider the problem of clustering observations using a potentially large set of features. One might expect that the true underlying clusters present in the data differ only with respect to a small fraction of the features, and will be missed if one clusters the observations using the full set of features. We propose a novel framework for sparse clustering, in which one clusters the observations using an adaptively chosen subset of the features. The method uses a…

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Covariance-Regularized Regression and Classification for high Dimensional Problems

高维问题中的协方差正则化回归与分类

Summary We propose covariance-regularized regression, a family of methods for prediction in high dimensional settings that uses a shrunken estimate of the inverse covariance matrix of the features to achieve superior prediction. An estimate of the inverse covariance matrix is obtained by maximizing the log-likelihood of the data, under a multivariate normal model, subject to a penalty; it is then used to estimate coefficients for the regression of the response onto the…

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“Preconditioning” for feature selection and regression in high-dimensional problems

高维变量选择与回归中的“预处理”

We consider regression problems where the number of predictors greatly exceeds the number of observations. We propose a method for variable selection that first estimates the regression function, yielding a “preconditioned” response variable. The primary method used for this initial regression is supervised principal components. Then we apply a standard procedure such as forward stepwise selection or the LASSO to the preconditioned response variable. In a number of simulated…

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On the “degrees of freedom” of the lasso

Lasso 的有效自由度

We study the effective degrees of freedom of the lasso in the framework of Stein’s unbiased risk estimation (SURE). We show that the number of nonzero coefficients is an unbiased estimate for the degrees of freedom of the lasso—a conclusion that requires no special assumption on the predictors. In addition, the unbiased estimator is shown to be asymptotically consistent. With these results on hand, various model selection criteria—Cp, AIC and BIC—are available, which, along…

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Prediction by Supervised Principal Components

监督主成分预测

In regression problems where the number of predictors greatly exceeds the number of observations, conventional regression techniques may produce unsatisfactory results. We describe a technique called supervised principal components that can be applied to this type of problem. Supervised principal components is similar to conventional principal components analysis except that it uses a subset of the predictors selected based on their association with the outcome. Supervised…

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Sparsity and Smoothness Via the Fused Lasso

通过融合 Lasso 实现稀疏性与平滑性

Summary The lasso penalizes a least squares regression by the sum of the absolute values (L1-norm) of the coefficients. The form of this penalty encourages sparse solutions (with many coefficients equal to 0). We propose the ‘fused lasso’, a generalization that is designed for problems with features that can be ordered in some meaningful way. The fused lasso penalizes the L1-norm of both the coefficients and their successive differences. Thus it encourages sparsity of the…

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Least angle regression

最小角回归

The purpose of model selection algorithms such as All Subsets, Forward Selection and Backward Elimination is to choose a linear model on the basis of the same set of data to which the model will be applied. Typically we have available a large collection of possible covariates from which we hope to select a parsimonious set for the efficient prediction of a response variable. Least Angle Regression (LARS), a new model selection algorithm, is a useful and less greedy version…

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Discussions of boosting papers, and rejoinders

关于提升方法论文的讨论及作者回应

Discussions of: "Process consistency for AdaBoost" [Ann. Statist. 32 (2004), no. 1, 13-29] by W. Jiang; "On the Bayes-risk consistency of regularized boosting methods" [ibid., 30-55] by G. Lugosi and N. Vayatis; and "Statistical behavior and consistency of classification methods based on convex risk minimization" [ibid., 56-85] by T. Zhang. Includes rejoinders by the authors.

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