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Conjugate Gradient Methods for High-Dimensional GLMMs

高维广义线性混合模型的共轭梯度方法

Generalized linear mixed models (GLMMs) are a widely used tool in statistical analysis. The main bottleneck of many computational approaches lies in the inversion of the high dimensional precision matrices associated with the random effects. Such matrices are typically sparse; however, the sparsity pattern resembles a multi partite random graph, which does not lend itself well to default sparse linear algebra techniques. Notably, we show that, for typical GLMMs, the Cholesky…

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Auxiliary Gradient-Based Sampling Algorithms

基于辅助变量与梯度的采样算法

Summary We introduce a new family of Markov chain Monte Carlo samplers that combine auxiliary variables, Gibbs sampling and Taylor expansions of the target density. Our approach permits the marginalization over the auxiliary variables, yielding marginal samplers, or the augmentation of the auxiliary variables, yielding auxiliary samplers. The well-known Metropolis-adjusted Langevin algorithm MALA and preconditioned Crank–Nicolson–Langevin algorithm pCNL are shown to be…

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Random-Weight Particle Filtering of Continuous Time Processes

Summary It is possible to implement importance sampling, and particle filter algorithms, where the importance sampling weight is random. Such random-weight algorithms have been shown to be efficient for inference for a class of diffusion models, as they enable inference without any (time discretization) approximation of the underlying diffusion model. One difficulty of implementing such random-weight algorithms is the requirement to have weights that are positive with…

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Monte Carlo maximum likelihood estimation for discretely observed diffusion processes

离散观测扩散过程的蒙特卡洛最大似然估计

This paper introduces a Monte Carlo method for maximum likelihood inference in the context of discretely observed diffusion processes. The method gives unbiased and a.s. continuous estimators of the likelihood function for a family of diffusion models and its performance in numerical examples is computationally efficient. It uses a recently developed technique for the exact simulation of diffusions, and involves no discretization error. We show that, under regularity…

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Particle Filters for Partially Observed Diffusions

部分观测扩散过程的粒子滤波

Summary We introduce a novel particle filter scheme for a class of partially observed multivariate diffusions. We consider a variety of observation schemes, including diffusion observed with error, observation of a subset of the components of the multivariate diffusion and arrival times of a Poisson process whose intensity is a known function of the diffusion (Cox process). Unlike currently available methods, our particle filters do not require approximations of the…

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Stability of the Gibbs sampler for Bayesian hierarchical models

贝叶斯层级模型中 Gibbs 采样器的稳定性

We characterize the convergence of the Gibbs sampler which samples from the joint posterior distribution of parameters and missing data in hierarchical linear models with arbitrary symmetric error distributions. We show that the convergence can be uniform, geometric or subgeometric depending on the relative tail behavior of the error distributions, and on the parametrization chosen. Our theory is applied to characterize the convergence of the Gibbs sampler on latent Gaussian…

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Exact and Computationally Efficient Likelihood-Based Estimation for Discretely Observed Diffusion Processes (with Discussion)

离散观测扩散过程的精确且计算高效的似然估计(含讨论)

Summary The objective of the paper is to present a novel methodology for likelihood-based inference for discretely observed diffusions. We propose Monte Carlo methods, which build on recent advances on the exact simulation of diffusions, for performing maximum likelihood and Bayesian estimation.

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Bayesian Inference for Non-Gaussian Ornstein–Uhlenbeck Stochastic Volatility Processes

非高斯 Ornstein–Uhlenbeck 随机波动过程的贝叶斯推断

Summary We develop Markov chain Monte Carlo methodology for Bayesian inference for non-Gaussian Ornstein–Uhlenbeck stochastic volatility processes. The approach introduced involves expressing the unobserved stochastic volatility process in terms of a suitable marked Poisson process. We introduce two specific classes of Metropolis–Hastings algorithms which correspond to different ways of jointly parameterizing the marked point process and the model parameters. The performance…

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