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Scalable Calibration of Individual-Based Epidemic Models through Categorical Approximations

通过类别分布近似实现个体疫情模型的可扩展校准

Traditional compartmental models capture population-level dynamics but fail to characterize individual-level risk. The computational cost of exact likelihood evaluation for partially observed individual-based models, however, grows exponentially with the population size, necessitating approximate inference. Existing sampling-based methods usually require multiple simulations of the individuals in the population and rely on bespoke proposal distributions or summary…

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Statistical exploration of the manifold hypothesis

流形假说的统计探索

Abstract The manifold hypothesis is a widely accepted tenet of machine learning which asserts that nominally high-dimensional data are in fact concentrated near a low-dimensional manifold, embedded in high-dimensional space. This phenomenon is observed empirically in many real-world situations, has led to development of a wide range of statistical methods in the last few decades, and has been suggested as a key factor in the success of modern AI technologies. We show that…

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Consistent and fast inference in compartmental models of epidemics using Poisson Approximate Likelihoods

利用泊松近似似然对流行病舱室模型进行一致且快速的推断

Abstract Addressing the challenge of scaling-up epidemiological inference to complex and heterogeneous models, we introduce Poisson approximate likelihood (PAL) methods. In contrast to the popular ordinary differential equation (ODE) approach to compartmental modelling, in which a large population limit is used to motivate a deterministic model, PALs are derived from approximate filtering equations for finite-population, stochastic compartmental models, and the large…

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Negative association, ordering and convergence of resampling methods

重抽样方法的负相依性、排序与收敛

We study convergence and convergence rates for resampling schemes. Our first main result is a general consistency theorem based on the notion of negative association, which is applied to establish the almost sure weak convergence of measures output from Kitagawa’s [J. Comput. Graph. Statist. 5 (1996) 1–25] stratified resampling method. Carpenter, Ckiffird and Fearnhead’s [IEE Proc. Radar Sonar Navig. 146 (1999) 2–7] systematic resampling method is similar in structure but…

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Twisted particle filters

扭曲粒子滤波器

We investigate sampling laws for particle algorithms and the influence of these laws on the efficiency of particle approximations of marginal likelihoods in hidden Markov models. Among a broad class of candidates we characterize the essentially unique family of particle system transition kernels which is optimal with respect to an asymptotic-in-time variance growth rate criterion. The sampling structure of the algorithm defined by these optimal transitions turns out to be…

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