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A Common Atoms Model for the Bayesian Nonparametric Analysis of Nested Data

用于嵌套数据贝叶斯非参数分析的共同原子模型

The use of large datasets for targeted therapeutic interventions requires new ways to characterize the heterogeneity observed across subgroups of a specific population. In particular, models for partially exchangeable data are needed for inference on nested datasets, where the observations are assumed to be organized in different units and some sharing of information is required to learn distinctive features of the units. In this manuscript, we propose a nested common atoms…

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A Bayesian Approach for Estimating Dynamic Functional Network Connectivity in fMRI Data

估计 fMRI 动态功能网络连接的贝叶斯方法

Dynamic functional connectivity, i.e., the study of how interactions among brain regions change dynamically over the course of an fMRI experiment, has recently received wide interest in the neuroimaging literature. Current approaches for studying dynamic connectivity often rely on ad-hoc approaches for inference, with the fMRI time courses segmented by a sequence of sliding windows. We propose a principled Bayesian approach to dynamic functional connectivity, which is based…

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False Discovery Control in Large-Scale Spatial Multiple Testing

大规模空间多重检验中的错误发现控制

Summary The paper develops a unified theoretical and computational framework for false discovery control in multiple testing of spatial signals. We consider both pointwise and clusterwise spatial analyses, and derive oracle procedures which optimally control the false discovery rate, false discovery exceedance and false cluster rate. A data-driven finite approximation strategy is developed to mimic the oracle procedures on a continuous spatial domain. Our multiple-testing…

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Generalized Species Sampling Priors With Latent Beta Reinforcements

具有潜在 Beta 强化的广义物种抽样先验

Many popular Bayesian nonparametric priors can be characterized in terms of exchangeable species sampling sequences. However, in some applications, exchangeability may not be appropriate. We introduce a novel and probabilistically coherent family of non-exchangeable species sampling sequences characterized by a tractable predictive probability function with weights driven by a sequence of independent Beta random variables. We compare their theoretical clustering properties…

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An Integrative Bayesian Modeling Approach to Imaging Genetics

影像遗传学的整合贝叶斯建模方法

In this paper we present a Bayesian hierarchical modeling approach for imaging genetics, where the interest lies in linking brain connectivity across multiple individuals to their genetic information. We have available data from a functional magnetic resonance (fMRI) study on schizophrenia. Our goals are to identify brain regions of interest (ROIs) with discriminating activation patterns between schizophrenic patients and healthy controls, and to relate the ROIs' activations…

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A Bayesian Discovery Procedure

一种贝叶斯发现程序

Summary We discuss a Bayesian discovery procedure for multiple-comparison problems. We show that, under a coherent decision theoretic framework, a loss function combining true positive and false positive counts leads to a decision rule that is based on a threshold of the posterior probability of the alternative. Under a semiparametric model for the data, we show that the Bayes rule can be approximated by the optimal discovery procedure, which was recently introduced by…

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Hybrid Dirichlet Mixture Models for Functional Data

函数型数据的混合式 Dirichlet 混合模型

Summary In functional data analysis, curves or surfaces are observed, up to measurement error, at a finite set of locations, for, say, a sample of n individuals. Often, the curves are homogeneous, except perhaps for individual-specific regions that provide heterogeneous behaviour (e.g. ‘damaged’ areas of irregular shape on an otherwise smooth surface). Motivated by applications with functional data of this nature, we propose a Bayesian mixture model, with the aim of…

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