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Bayesian Nonparametric Common Atoms Regression for Generating Synthetic Controls in Clinical Trials

利用贝叶斯非参数共同原子回归构建临床试验合成对照

The availability of electronic health records (EHR) has opened opportunities to supplement increasingly expensive and difficult to carry out randomized controlled trials (RCT) with evidence from readily available real world data. In this paper, we use EHR data to construct synthetic control arms for treatment-only single arm trials. We propose a novel nonparametric Bayesian common atoms mixture model that allows us to find equivalent population strata in the EHR and the…

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Bayesian Semiparametric Longitudinal Drift-Diffusion Mixed Models for Tone Learning in Adults

成人声调学习的贝叶斯半参数纵向漂移扩散混合模型

Understanding how adult humans learn nonnative speech categories such as tone information has shed novel insights into the mechanisms underlying experience-dependent brain plasticity. Scientists have traditionally examined these questions using longitudinal learning experiments under a multi-category decision making paradigm. Drift-diffusion processes are popular in such contexts for their ability to mimic underlying neural mechanisms. Motivated by these problems, we develop…

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Bayesian Copula Density Deconvolution for Zero-Inflated Data in Nutritional Epidemiology

营养流行病学零膨胀数据的贝叶斯 Copula 密度反卷积

Estimating the marginal and joint densities of the long-term average intakes of different dietary components is an important problem in nutritional epidemiology. Since these variables cannot be directly measured, data are usually collected in the form of 24-hour recalls of the intakes, which show marked patterns of conditional heteroscedasticity. Significantly compounding the challenges, the recalls for episodically consumed dietary components also include exact zeros. The…

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A Powerful Bayesian Test for Equality of Means in High Dimensions

高维均值相等性的高功效贝叶斯检验

We develop a Bayes factor-based testing procedure for comparing two population means in high-dimensional settings. In ‘large-p-small-n” settings, Bayes factors based on proper priors require eliciting a large and complex p × p covariance matrix, whereas Bayes factors based on Jeffrey’s prior suffer the same impediment as the classical Hotelling T2 test statistic as they involve inversion of ill-formed sample covariance matrices. To circumvent this limitation, we propose that…

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Bayesian Semiparametric Mixed Effects Markov Models With Application to Vocalization Syntax

贝叶斯半参数混合效应马尔可夫模型及发声语法应用

Studying the neurological, genetic, and evolutionary basis of human vocal communication mechanisms using animal vocalization models is an important field of neuroscience. The datasets typically comprise structured sequences of syllables or “songs” produced by animals from different genotypes under different social contexts. It has been difficult to come up with sophisticated statistical methods that appropriately model animal vocal communication syntax. We address this need…

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Bayesian Semiparametric Multivariate Density Deconvolution

贝叶斯半参数多元密度反卷积

We consider the problem of multivariate density deconvolution when interest lies in estimating the distribution of a vector valued random variable X but precise measurements on X are not available, observations being contaminated by measurement errors U. The existing sparse literature on the problem assumes the density of the measurement errors to be completely known. We propose robust Bayesian semiparametric multivariate deconvolution approaches when the measurement error…

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Bayesian Nonparametric Modeling of Higher Order Markov Chains

高阶马尔可夫链的贝叶斯非参数建模

We consider the problem of flexible modeling of higher order Markov chains when an upper bound on the order of the chain is known but the true order and nature of the serial dependence are unknown. We propose Bayesian nonparametric methodology based on conditional tensor factorizations, which can characterize any transition probability with a specified maximal order. The methodology selects the important lags and captures higher order interactions among the lags, while also…

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