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Operator-induced structural variable selection for identifying materials genes

算子诱导的结构变量选择:识别材料基因

In the emerging field of materials informatics, a fundamental task is to identify physicochemically meaningful descriptors, or materials genes, which are engineered from primary features and a set of elementary algebraic operators through compositions. Standard practice directly analyzes the high-dimensional candidate predictor space in a linear model; statistical analyses are then substantially hampered by the daunting challenge posed by the astronomically large number of…

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Bayesian nonparametric generative modeling of large multivariate non-Gaussian spatial fields

大尺度多变量非高斯空间场的贝叶斯非参数生成建模

Multivariate spatial fields are of interest in many applications, including climate model emulation. Not only can the marginal spatial fields be subject to nonstationarity, but the dependence structure among the marginal fields and between the fields might also differ substantially. Extending a recently proposed Bayesian approach to describe the distribution of a nonstationary univariate spatial field using a triangular transport map, we cast the inference problem for a…

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Robust angle-based transfer learning in high dimensions

高维稳健的基于角度的迁移学习

Transfer learning aims to improve the performance of a target model by leveraging data from related source populations, which is known to be especially helpful in cases with insufficient target data. In this paper, we study the problem of how to train a high-dimensional ridge regression model using limited target data and existing regression models trained in heterogeneous source populations. We consider a practical setting where only the parameter estimates of the fitted…

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Bayesian Tensor Factorisations for Time Series of Counts

计数时间序列的贝叶斯张量分解

We propose a flexible nonparametric Bayesian modelling framework for multivariate time series of count data based on tensor factorisations. Our models can be viewed as infinite state space Markov chains of known maximal order with non-linear serial dependence through the introduction of appropriate latent variables. Alternatively, our models can be viewed as Bayesian hierarchical models with conditionally independent Poisson distributed observations. Inference about the…

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Robust covariance estimation with missing values and cell-wise contamination

缺失值与逐格污染下的稳健协方差估计

Large datasets are often affected by cell-wise outliers in the form of missing or erroneous data. However, discarding any samples containing outliers may result in a dataset that is too small to accurately estimate the covariance matrix. Moreover, the robust procedures designed to address this problem require the invertibility of the covariance operator and thus are not effective on high-dimensional data. In this paper, we propose an unbiased estimator for the covariance in…

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Causal inference with a functional outcome

函数型结果的因果推断

This paper presents methods to study the causal effect of a binary treatment on a functional outcome with observational data. We define a Functional Average Treatment Effect and develop an outcome regression estimator. We show how to obtain valid inference on the FATE using simultaneous confidence bands, which cover the FATE with a given probability over the entire domain. Simulation experiments illustrate how the simultaneous confidence bands take the multiple comparison…

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Unified Inference for Dynamic Quantile Predictive Regression

动态分位数预测回归的统一推断

This paper develops unified asymptotic distribution theory for dynamic quantile predictive regressions which is useful when examining quantile predictability in stock returns under possible presence of nonstationarity.

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Semiparametric Discrete Choice Models for Bundles

商品组合选择的半参数离散选择模型

We propose two approaches to estimate semiparametric discrete choice models for bundles. Our first approach is a kernel-weighted rank estimator based on a matching-based identification strategy. We establish its complete asymptotic properties and prove the validity of the nonparametric bootstrap for inference. We then introduce a new multi-index least absolute deviations (LAD) estimator as an alternative, of which the main advantage is its capacity to estimate preference…

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CausalImages: An R Package for Causal Inference with Earth Observation, Bio-medical, and Social Science Images

CausalImages:面向地球观测、生物医学与社会科学图像的因果推断 R 包

The causalimages R package enables causal inference with image and image sequence data, providing new tools for integrating novel data sources like satellite and bio-medical imagery into the study of cause and effect. One set of functions enables image-based causal inference analyses. For example, one key function decomposes treatment effect heterogeneity by images using an interpretable Bayesian framework. This allows for determining which types of images or image sequences…

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Estimating Causal Effects with Hidden Confounding using Instrumental Variables and Environments

利用工具变量与环境估计存在隐藏混杂的因果效应

Recent works have proposed regression models which are invariant across data collection environments. These estimators often have a causal interpretation under conditions on the environments and type of invariance imposed. One recent example, the Causal Dantzig (CD), is consistent under hidden confounding and represents an alternative to classical instrumental variable estimators such as Two Stage Least Squares (TSLS). In this work we derive the CD as a generalized method of…

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An iterative algorithm for high-dimensional linear models with both sparse and non-sparse structures

含稀疏与非稀疏结构的高维线性模型迭代算法

Numerous practical medical problems often involve data that possess a combination of both sparse and non-sparse structures. Traditional penalized regularizations techniques, primarily designed for promoting sparsity, are inadequate to capture the optimal solutions in such scenarios. To address these challenges, this paper introduces a novel algorithm named Non-sparse Iteration (NSI). The NSI algorithm allows for the existence of both sparse and non-sparse structures and…

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Counterfactually Comparing Abstaining Classifiers

以反事实方式比较可拒绝预测的分类器

Abstaining classifiers have the option to abstain from making predictions on inputs that they are unsure about. These classifiers are becoming increasingly popular in high-stakes decision-making problems, as they can withhold uncertain predictions to improve their reliability and safety. When evaluating black-box abstaining classifier(s), however, we lack a principled approach that accounts for what the classifier would have predicted on its abstentions. These missing…

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Implementing measurement error models with mechanistic mathematical models in a likelihood-based framework for estimation, identifiability analysis, and prediction in the life sciences

在基于似然的框架中实现测量误差模型与机制数学模型:生命科学中的估计、可识别性分析与预测

Throughout the life sciences we routinely seek to interpret measurements and observations using parameterised mechanistic mathematical models. A fundamental and often overlooked choice in this approach involves relating the solution of a mathematical model with noisy and incomplete measurement data. This is often achieved by assuming that the data are noisy measurements of the solution of a deterministic mathematical model, and that measurement errors are additive and…

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Identifiability Guarantees for Causal Disentanglement from Soft Interventions

软干预下因果解耦的可识别性保证

Causal disentanglement aims to uncover a representation of data using latent variables that are interrelated through a causal model. Such a representation is identifiable if the latent model that explains the data is unique. In this paper, we focus on the scenario where unpaired observational and interventional data are available, with each intervention changing the mechanism of a latent variable. When the causal variables are fully observed, statistically consistent…

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Long-Term Causal Inference with Imperfect Surrogates using Many Weak Experiments, Proxies, and Cross-Fold Moments

不完美替代指标下的长期因果推断:众多弱实验、代理与跨折矩

Inferring causal effects on long-term outcomes using short-term surrogates is crucial to rapid innovation. However, even when treatments are randomized and surrogates fully mediate their effect on outcomes, it's possible that we get the direction of causal effects wrong due to confounding between surrogates and outcomes -- a situation famously known as the surrogate paradox. The availability of many historical experiments offer the opportunity to instrument for the surrogate…

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Bootstrap inference in the presence of bias

存在偏误时的 Bootstrap 推断

We consider bootstrap inference for estimators which are (asymptotically) biased. We show that, even when the bias term cannot be consistently estimated, valid inference can be obtained by proper implementations of the bootstrap. Specifically, we show that the prepivoting approach of Beran (1987, 1988), originally proposed to deliver higher-order refinements, restores bootstrap validity by transforming the original bootstrap p-value into an asymptotically uniform random…

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Learned Causal Method Prediction

通过学习预测适用的因果方法

For a given causal question, it is important to efficiently decide which causal inference method to use for a given dataset. This is challenging because causal methods typically rely on complex and difficult-to-verify assumptions, and cross-validation is not applicable since ground truth causal quantities are unobserved. In this work, we propose CAusal Method Predictor (CAMP), a framework for predicting the best method for a given dataset. To this end, we generate datasets…

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Flexibly Estimating and Interpreting Heterogeneous Treatment Effects of Laparoscopic Surgery for Cholecystitis Patients

灵活估计与解释胆囊炎患者腹腔镜手术的异质性治疗效应

Laparoscopic surgery has been shown through a number of randomized trials to be an effective form of treatment for cholecystitis. Given this evidence, one natural question for clinical practice is: does the effectiveness of laparoscopic surgery vary among patients? It might be the case that, while the overall effect is positive, some patients treated with laparoscopic surgery may respond positively to the intervention while others do not or may be harmed. In our study, we…

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How Much Should We Trust Instrumental Variable Estimates in Political Science? Practical Advice Based on Over 60 Replicated Studies

政治学中的工具变量估计有多可信?基于六十余项复现的实践建议

Instrumental variable (IV) strategies are widely used in political science to establish causal relationships. However, the identifying assumptions required by an IV design are demanding, and it remains challenging for researchers to assess their validity. In this paper, we replicate 67 papers published in three top journals in political science during 2010-2022 and identify several troubling patterns. First, researchers often overestimate the strength of their IVs due to…

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On Gaussian Process Priors in Conditional Moment Restriction Models

条件矩限制模型中的高斯过程先验

This paper studies quasi Bayesian estimation and uncertainty quantification for an unknown function that is identified by a nonparametric conditional moment restriction. We derive contraction rates for a class of Gaussian process priors. Furthermore, we provide conditions under which a Bernstein von Mises theorem holds for the quasi-posterior distribution. As a consequence, we show that optimally weighted quasi-Bayes credible sets have exact asymptotic frequentist coverage.

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Asymmetric predictability in causal discovery: an information theoretic approach

因果发现中的预测不对称性:信息论方法

Causal investigations in observational studies pose a great challenge in research where randomized trials or intervention-based studies are not feasible. We develop an information geometric causal discovery and inference framework of "predictive asymmetry". For $(X, Y)$, predictive asymmetry enables assessment of whether $X$ is more likely to cause $Y$ or vice-versa. The asymmetry between cause and effect becomes particularly simple if $X$ and $Y$ are deterministically…

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Asymptotic Properties of Endogeneity Corrections Using Nonlinear Transformations

利用非线性变换修正内生性的渐近性质

This paper considers a linear regression model with an endogenous regressor which arises from a nonlinear transformation of a latent variable. It is shown that the corresponding coefficient can be consistently estimated without external instruments by adding a rank-based transformation of the regressor to the model and performing standard OLS estimation. In contrast to other approaches, our nonparametric control function approach does not rely on a conformably specified…

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Debiased Fixed Effects Estimation of Binary Logit Models with Three-Dimensional Panel Data

三维面板二元 Logit 模型的去偏固定效应估计

Naive maximum likelihood estimation of binary logit models with fixed effects leads to unreliable inference due to the incidental parameter problem. We study the case of three-dimensional panel data, where the model includes three sets of additive and overlapping unobserved effects. This encompasses models for network panel data, where senders and receivers maintain bilateral relationships over time, and fixed effects account for unobserved heterogeneity at the sender-time,…

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Conditional Randomization Tests for Behavioral and Neural Time Series

行为与神经时间序列的条件随机化检验

Randomization tests allow simple and unambiguous tests of null hypotheses, by comparing observed data to a null ensemble in which experimentally-controlled variables are randomly resampled. In behavioral and neuroscience experiments, however, the stimuli presented often depend on the subject's previous actions, so simple randomization tests are not possible. We describe how conditional randomization can be used to perform exact hypothesis tests in this situation, and…

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