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Finite-Sample Risk Approximation and Risk-Consistent Tuning for Generalized Ridge Estimation in Nonlinear Models: Controlling Extreme Realizations

非线性模型中广义岭估计的有限样本风险近似与风险一致调参

Maximum likelihood estimation in nonlinear models can exhibit substantial instability in finite samples when the data provide limited information about certain parameters. Such instability is driven by rare but extreme realizations of the estimator, which can dominate mean squared error (MSE) and lead to poor performance of conventional estimators. To address this issue, we consider ridge estimators that directly target MSE through regularization and thereby control extreme…

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Quantifying structural uncertainty in chemical reaction network inference

量化化学反应网络推断中的结构不确定性

Dynamical systems in biology are complex, and one often does not have comprehensive knowledge about the interactions involved. Chemical reaction network (CRN) inference aims to identify, from observing species concentrations over time, the unknown reactions between the species. Existing approaches such as sparse regularisation largely focus on identifying a single, most likely CRN, without addressing uncertainty about the network structure. However, it is important to…

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Principled Inference in Dense High-Dimensional Linear Models via Local Conditional Sparsity

基于局部条件稀疏性的稠密高维线性模型原则化推断

High-dimensional inference methods often rely on coefficient sparsity, an assumption that can be restrictive when signals are dense but individually weak. In such settings, valid inference may still be possible if the covariates exhibit sparse conditional dependence. Motivated by this observation, we propose Neighborhood-Localized Nested Regression (NLNR), a framework for coordinatewise inference in high-dimensional linear models with potentially dense coefficients. The…

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Average Marginal Effects in One-Step Partially Linear Instrumental Regressions

一步部分线性工具变量回归中的平均边际效应

We propose a novel procedure for estimating and conducting inference on average marginal effects in partially linear instrumental regressions using Reproducing Kernel Hilbert Space methods. Our procedure relies on a single regularization parameter. We obtain the consistency and asymptotic normality of our estimator. Since the variance of the limiting distribution has a complex analytical form, we propose a Bayesian bootstrap method to conduct inference and establish its…

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Transfer Learning for Moderate-Dimensional Ridge-Regularized Robust Linear Regression

中等维度岭正则化稳健线性回归的迁移学习

This paper studies transfer learning for ridge-regularized robust linear regression in the moderate-dimensional regime, where the number of predictors is of the same order as the sample size and the regression coefficients are not assumed to be sparse. We propose Trans-RR, which combines a robust ridge estimator from a source study with a robust ridge correction based on the target study. Under mild assumptions, we characterize the asymptotic estimation error of the proposed…

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Gaussian Graphical Models for Functional Connectivity Analysis: A Statistical Review with Applications to Alzheimer's Disease

高斯图模型用于功能连接分析:面向阿尔茨海默病的统计综述

Functional connectivity analysis is an important tool for characterizing interactions among brain regions, particularly in studies of neurodegenerative disorders such as Alzheimer's disease (AD). Gaussian graphical models (GGMs) provide a promising statistical framework for estimating functional connectivity by capturing conditional dependence relationships among brain regions. Although a variety of regularized precision matrix estimators have been proposed to estimate…

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Regularized estimation for highly multivariate spatial Gaussian random fields

高维多元空间高斯随机场的正则化估计

Estimating covariance parameters for multivariate spatial Gaussian random fields is computationally challenging, as the number of parameters grows rapidly with the number of variables, and likelihood evaluation requires operations of order $\mathcal{O}((np)^3)$. In many applications, however, not all cross-dependencies between variables are relevant, suggesting that sparse covariance structures may be both statistically advantageous and practically necessary. We propose a…

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Virtual Dummies: Enabling Scalable FDR-Controlled Variable Selection via Sequential Sampling of Null Features

虚拟哑变量:通过零特征序贯抽样实现可扩展的FDR受控变量选择

High-dimensional variable selection, particularly in genomics, requires error-controlling procedures that scale to millions of predictors. The Terminating-Random Experiments (T-Rex) selector achieves false discovery rate (FDR) control by aggregating results of early terminated random experiments, each combining original predictors with i.i.d. synthetic null variables (dummies). At biobank scales, however, explicit dummy augmentation requires terabytes of memory. We…

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A New Regression Lens on Multi-Class Classification

多类分类的回归新视角

Linear Discriminant Analysis (LDA) is a fundamental method for classification. Its simple linear structure facilitates interpretation, and it is naturally suited to multi-class settings. LDA is also closely connected to several classical multivariate techniques, including Fisher's discriminant analysis, canonical correlation analysis, and linear regression. In this paper, we strengthen the connection between LDA and multivariate response regression by establishing an…

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Non-asymptotic two-sample kernel testing with the spectrally truncated normalized MMD

基于谱截断归一化MMD的非渐近两样本核检验

Kernel methods provide a flexible and powerful framework for nonparametric statistical testing by embedding probability distributions into a reproducing kernel Hilbert space (RKHS). In this work, we study the kernel two-sample testing problem and focus on a normalized version of the Maximum Mean Discrepancy (MMD) as a test statistic, which scales the discrepancy by the within-group covariance operator to account for data variability. This normalization has been shown to…

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Time Series Gaussian Chain Graph Models

时间序列高斯链图模型

Time series graphical models have recently received considerable attention for characterizing (conditional) dependence structures in multivariate time series. In many applications, the multivariate series exhibit variable-partitioned blockwise dependence, with distinct patterns within and across blocks. In this paper, we introduce a new class of time series Gaussian chain graph models that represent contemporaneous and lagged causal relations via directed edges across…

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Hypothesis Testing for Penalized Estimating Equations with Cross-Fitted Covariance Calibration

交叉拟合协方差校准下惩罚估计方程的假设检验

We study hypothesis testing for penalized estimators in settings where the full marginal distribution of a multivariate response is difficult to specify, such as longitudinal data with correlated measurements or high-dimensional heteroscedastic regression. Assuming that the conditional mean model is correctly specified, we establish that the penalized estimating equations admit a $\sqrt{n}$-consistent solution, even when the working covariance structure is misspecified. Our…

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Rank-Based Sparse Regression in Principal Components Space under Measurement Error

测量误差下主成分空间中的秩基稀疏回归

We study high-dimensional regression in principal components space when the predictors are observed with additive measurement error and the response errors may be heavy-tailed. The starting point is the $\ell_1$-penalized principal-components estimator of Song and Zou (2026), which enjoys a blessing-of-dimensionality phenomenon under predictor contamination but senstive for heavy-tailed data or outliers. We replace the squared loss by a Wilcoxon-type rank loss and then apply…

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Debiased Estimators in High-Dimensional Regression: A Review and Replication of Javanmard and Montanari (2014)

高维回归中的去偏估计:Javanmard 与 Montanari (2014) 的综述与复制

High-dimensional statistical settings ($p \gg n$) pose fundamental challenges for classical inference, largely due to bias introduced by regularized estimators such as the LASSO. To address this, Javanmard and Montanari (2014) propose a debiased estimator that enables valid hypothesis testing and confidence interval construction. This report examines their debiased LASSO framework, which yields asymptotically normal estimators in high-dimensional settings. The key…

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The Generalised Kernel Covariance Measure

广义核协方差度量

We consider the problem of conditional independence (CI) testing and adopt a kernel-based approach. Kernel-based CI tests embed variables in reproducing kernel Hilbert spaces, regress their embeddings on the conditioning variables, and test the resulting residuals for marginal independence. This approach yields tests that are sensitive to a broad range of conditional dependencies. Existing methods, however, rely heavily on kernel ridge regression, which is computationally…

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High-dimensional Many-to-many-to-many Mediation Analysis

高维多对多对多中介分析

We study high-dimensional mediation analysis in which exposures, mediators, and outcomes are all multivariate, and both exposures and mediators may be high-dimensional. We formalize this as a many (exposures)-to-many (mediators)-to-many (outcomes) (MMM) mediation analysis problem. Methodologically, MMM mediation analysis simultaneously performs variable selection for high-dimensional exposures and mediators, estimates the indirect effect matrix (i.e., the coefficient…

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Degrees of Freedom in Penalized Regression: Model Selection with Adaptive Penalties

惩罚回归中的自由度:自适应惩罚下的模型选择

Model selection in penalized regression critically depends on an accurate assessment of model complexity, commonly quantified through the effective degrees of freedom. While the Lasso admits a simple and unbiased characterization, given by the size of the active set, this property does not extend to adaptive penalization methods, despite the widespread use of this approximation in practice. To solve this issue, in this paper we derive a novel unbiased estimator of the…

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Penalized GMM Framework for Inference on Functionals of Nonparametric Instrumental Variable Estimators

非参数工具变量估计泛函推断的惩罚 GMM 框架

This paper develops a penalized GMM (PGMM) framework for automatic debiased inference on functionals of nonparametric instrumental variable estimators. We derive convergence rates for the PGMM estimator and provide conditions for root-n consistency and asymptotic normality of debiased functional estimates, covering both linear and nonlinear functionals. Monte Carlo experiments on average derivative show that the PGMM-based debiased estimator performs on par with the…

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Regularizing Attention Scores with Bootstrapping

用自助法正则化注意力分数

Vision transformers (ViT) rely on attention mechanism to weigh input features, and therefore attention scores have naturally been considered as explanations for its decision-making process. However, attention scores are almost always non-zero, resulting in noisy and diffused attention maps and limiting interpretability. Can we quantify uncertainty measures of attention scores and obtain regularized attention scores? To this end, we consider attention scores of ViT in a…

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Learning When the Concept Shifts: Confounding, Invariance, and Dimension Reduction

概念发生漂移时的学习:混杂、不变性与降维

Practitioners often face the challenge of deploying prediction models in new environments with shifted distributions of covariates and responses. With observational data, such shifts are often driven by unobserved confounding, and can in fact alter the concept of which model is best. This paper studies distribution shifts in the domain adaptation problem with unobserved confounding. We postulate a linear structural causal model to account for endogeneity and unobserved…

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Identifying Drift, Diffusion, and Causal Structure from Temporal Snapshots

从时间快照识别漂移、扩散与因果结构

Stochastic differential equations (SDEs) are a fundamental tool for modelling dynamic processes, including gene regulatory networks (GRNs), contaminant transport, financial markets, and image generation. However, learning the underlying SDE from data is a challenging task, especially if individual trajectories are not observable. Motivated by burgeoning research in single-cell datasets, we present the first comprehensive approach for jointly identifying the drift and…

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Regularizing Extrapolation in Causal Inference

因果推断中的外推正则化

Many common estimators in machine learning and causal inference are linear smoothers, where the prediction is a weighted average of the training outcomes. Some estimators, such as ordinary least squares and kernel ridge regression, allow for arbitrarily negative weights, which improve feature imbalance but often at the cost of increased dependence on parametric modeling assumptions and higher variance. By contrast, estimators like importance weighting and random forests…

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When Bayes goes bad: Weakly-regularized covariate adjustment leads to a biased estimate of prevalence

当贝叶斯方法失效:弱正则化协变量调整导致患病率估计偏倚

When estimating population prevalence from a non-random sample, it is important to adjust for differences between sample and population. However, adjustment for multiple factors requires analysis that can be difficult to understand and validate. In this manuscript, we explore an unexpected downward trend of estimates when covariates are added sequentially to a Bayesian hierarchical model for the estimation of the prevalence of SARS-CoV-2 specific antibodies in an Australian…

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Likelihood-Free Inference via Structured Score Matching

基于结构化得分匹配的无似然推断

In many statistical problems, the data distribution is specified through a generative process for which the likelihood function is analytically intractable, yet inference on the associated model parameters remains of primary interest. We develop a likelihood-free inference framework that combines score matching with gradient-based optimization and bootstrap procedures to facilitate parameter estimation together with uncertainty quantification. The proposed methodology…

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