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TreatmentEstimatoR: a Dashboard for Estimating Treatment Effects from Observational Health Data

TreatmentEstimatoR:观测健康数据处理效应估计仪表板

Observational health data can be leveraged to measure the real-world use and potential benefits or risks of existing medical interventions. However, lack of programming proficiency and advanced knowledge of causal inference methods excludes some clinicians and non-computational researchers from performing such analyses. Code-free dashboard tools provide accessible means to estimate and visualize treatment effects from observational health data. We present TreatmentEstimatoR,…

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Standard and reference-based conditional mean imputation

标准与参照组条件均值插补

Clinical trials with longitudinal outcomes typically include missing data due to missed assessments or structural missingness of outcomes after intercurrent events handled with a hypothetical strategy. Approaches based on Bayesian random multiple imputation and Rubin's rule for pooling results across multiple imputed datasets are increasingly used in order to align the analysis of these trials with the targeted estimand. We propose and justify deterministic conditional mean…

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Sensitivity analysis in longitudinal clinical trials via distributional imputation

通过分布插补开展纵向临床试验敏感性分析

Missing data is inevitable in longitudinal clinical trials. Conventionally, the missing at random assumption is assumed to handle missingness, which however is unverifiable empirically. Thus, sensitivity analysis is critically important to assess the robustness of the study conclusions against untestable assumptions. Toward this end, regulatory agencies often request using imputation models such as return-to-baseline, control-based, and washout imputation. Multiple…

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Random Graph Asymptotics for Treatment Effect Estimation under Network Interference

网络干扰下处理效应估计的随机图渐近理论

The network interference model for causal inference places all experimental units at the vertices of an undirected exposure graph, such that treatment assigned to one unit may affect the outcome of another unit if and only if these two units are connected by an edge. This model has recently gained popularity as means of incorporating interference effects into the Neyman--Rubin potential outcomes framework; and several authors have considered estimation of various causal…

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Bias in multivariable Mendelian randomization studies due to measurement error on exposures

暴露测量误差导致的多变量孟德尔随机化偏倚

Multivariable Mendelian randomization estimates the causal effect of multiple exposures on an outcome, typically using summary statistics of genetic variant associations. However, exposures of interest in Mendelian randomization applications will often be measured with error. The summary statistics will therefore not be of the genetic associations with the exposure, but with the exposure measured with error. Classical measurement error will not bias genetic association…

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Undersmoothing Causal Estimators with Generative Trees

利用生成树对因果估计器进行欠平滑处理

Inferring individualised treatment effects from observational data can unlock the potential for targeted interventions. It is, however, hard to infer these effects from observational data. One major problem that can arise is covariate shift where the data (outcome) conditional distribution remains the same but the covariate (input) distribution changes between the training and test set. In an observational data setting, this problem is materialised in control and treated…

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Distributed Design for Causal Inferences on Big Observational Data

大型观察数据因果推断的分布式研究设计

A fundamental issue in causal inference for Big Observational Data is confounding due to covariate imbalances between treatment groups. This can be addressed by designing the data prior to analysis. Existing design methods, developed for traditional observational studies with single designers, can yield unsatisfactory designs with suboptimum covariate balance for Big Observational Data due to their inability to accommodate the massive dimensionality, heterogeneity, and…

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On the implementation of Approximate Randomization Tests in Linear Models with a Small Number of Clusters

少量聚类线性模型中近似随机化检验的实施

This paper provides a user's guide to the general theory of approximate randomization tests developed in Canay, Romano, and Shaikh (2017) when specialized to linear regressions with clustered data. An important feature of the methodology is that it applies to settings in which the number of clusters is small -- even as small as five. We provide a step-by-step algorithmic description of how to implement the test and construct confidence intervals for the parameter of…

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Spatial modeling of day-within-year temperature time series: an examination of daily maximum temperatures in Aragón, Spain

年内日温度序列的空间建模:西班牙阿拉贡日最高温研究

Acknowledging a considerable literature on modeling daily temperature data, we propose a multi-level spatio-temporal model which introduces several innovations in order to explain the daily maximum temperature in the summer period over 60 years in a region containing Aragón, Spain. The model operates over continuous space but adopts two discrete temporal scales, year and day within year. It captures temporal dependence through autoregression on days within year and also on…

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Modelling hetegeneous treatment effects by quantitle local polynomial decision tree and forest

利用分位点局部多项式决策树与森林建模异质性处理效应

To further develop the statistical inference problem for heterogeneous treatment effects, this paper builds on Breiman's (2001) random forest tree (RFT)and Wager et al.'s (2018) causal tree to parameterize the nonparametric problem using the excellent statistical properties of classical OLS and the division of local linear intervals based on covariate quantile points, while preserving the random forest trees with the advantages of constructible confidence intervals and…

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Bayesian Inference in High-Dimensional Time-Serieswith the Orthogonal Stochastic Linear Mixing Model

基于正交随机线性混合模型的高维时间序列贝叶斯推断

Many modern time-series datasets contain large numbers of output response variables sampled for prolonged periods of time. For example, in neuroscience, the activities of 100s-1000's of neurons are recorded during behaviors and in response to sensory stimuli. Multi-output Gaussian process models leverage the nonparametric nature of Gaussian processes to capture structure across multiple outputs. However, this class of models typically assumes that the correlations between…

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Bayesian Copula Directional Dependence for causal inference on gene expression data

用于基因表达数据因果推断的贝叶斯 Copula 方向依赖

Modelling and understanding directional gene networks is a major challenge in biology as they play an important role in the architecture and function of genetic systems. Copula Directional Dependence (CDD) can measure the directed connectivity among variables without any strict requirements of distributional and linearity assumptions. Furthermore, copulas can achieve that by isolating the dependence structure of a joint distribution. In this work, a novel extension of the…

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Multi-Task Adversarial Learning for Treatment Effect Estimation in Basket Trials

篮式试验中处理效应估计的多任务对抗学习

Estimating treatment effects from observational data provides insights about causality guiding many real-world applications such as different clinical study designs, which are the formulations of trials, experiments, and observational studies in medical, clinical, and other types of research. In this paper, we describe causal inference for application in a novel clinical design called basket trial that tests how well a new drug works in patients who have different types of…

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Factor-augmented model for functional data

函数型数据的因子增强模型

We propose modeling raw functional data as a mixture of a smooth function and a high-dimensional factor component. The conventional approach to retrieving the smooth function from the raw data is through various smoothing techniques. However, the smoothing model is inadequate to recover the smooth curve or capture the data variation in some situations. These include cases where there is a large amount of measurement error, the smoothing basis functions are incorrectly…

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Time Series Estimation of the Dynamic Effects of Disaster-Type Shock

灾难型冲击动态效应的时间序列估计

This paper provides three results for SVARs under the assumption that the primitive shocks are mutually independent. First, a framework is proposed to accommodate a disaster-type variable with infinite variance into a SVAR. We show that the least squares estimates of the SVAR are consistent but have non-standard asymptotics. Second, the disaster shock is identified as the component with the largest kurtosis and whose impact effect is negative. An estimator that is robust to…

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Minimax Kernel Machine Learning for a Class of Doubly Robust Functionals with Application to Proximal Causal Inference

双重稳健泛函的极小极大核学习及近端因果推断应用

Robins et al. (2008) introduced a class of influence functions (IFs) which could be used to obtain doubly robust moment functions for the corresponding parameters. However, that class does not include the IF of parameters for which the nuisance functions are solutions to integral equations. Such parameters are particularly important in the field of causal inference, specifically in the recently proposed proximal causal inference framework of Tchetgen Tchetgen et al. (2020),…

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Sequential Gaussian approximation for nonstationary time series in high dimensions

高维非平稳时间序列的序贯高斯近似

Gaussian couplings of partial sum processes are derived for the high-dimensional regime $d=o(n^{1/3})$. The coupling is derived for sums of independent random vectors and subsequently extended to nonstationary time series. Our inequalities depend explicitly on the dimension and on a measure of nonstationarity, and are thus also applicable to arrays of random vectors. To enable high-dimensional statistical inference, a feasible Gaussian approximation scheme is proposed.…

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Smooth Online Parameter Estimation for time varying VAR models with application to rat's LFP data

时变 VAR 模型的平滑在线参数估计:大鼠局部场电位应用

Multivariate time series data appear often as realizations of non-stationary processes where the covariance matrix or spectral matrix smoothly evolve over time. Most of the current approaches estimate the time-varying spectral properties only retrospectively - that is, after the entire data has been observed. Retrospective estimation is a major limitation in many adaptive control applications where it is important to estimate these properties and detect changes in the system…

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Differentiable Causal Discovery Under Latent Interventions

潜在干预下的可微因果发现

Recent work has shown promising results in causal discovery by leveraging interventional data with gradient-based methods, even when the intervened variables are unknown. However, previous work assumes that the correspondence between samples and interventions is known, which is often unrealistic. We envision a scenario with an extensive dataset sampled from multiple intervention distributions and one observation distribution, but where we do not know which distribution…

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Latent Unbalancedness in Three-Way Gravity Models

三维引力模型中的潜在非平衡性

Many panel data sets used for pseudo-poisson estimation of three-way gravity models are implicitly unbalanced because uninformative observations are redundant for the estimation. We show with real data as well as simulations that this phenomenon, which we call latent unbalancedness, amplifies the inference problem recently studied by Weidner and Zylkin (2021).

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Online Balanced Experimental Design

在线平衡实验设计

e consider the experimental design problem in an online environment, an important practical task for reducing the variance of estimates in randomized experiments which allows for greater precision, and in turn, improved decision making. In this work, we present algorithms that build on recent advances in online discrepancy minimization which accommodate both arbitrary treatment probabilities and multiple treatments. The proposed algorithms are computational efficient,…

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Are Latent Factor Regression and Sparse Regression Adequate?

潜在因子回归与稀疏回归是否充分?

We propose the Factor Augmented sparse linear Regression Model (FARM) that not only encompasses both the latent factor regression and sparse linear regression as special cases but also bridges dimension reduction and sparse regression together. We provide theoretical guarantees for the estimation of our model under the existence of sub-Gaussian and heavy-tailed noises (with bounded (1+x)-th moment, for all x>0), respectively. In addition, the existing works on supervised…

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Minimax Risk in Estimating Kink Threshold and Testing Continuity

折点阈值估计与连续性检验的极小极大风险

We derive a risk lower bound in estimating the threshold parameter without knowing whether the threshold regression model is continuous or not. The bound goes to zero as the sample size $ n $ grows only at the cube root rate. Motivated by this finding, we develop a continuity test for the threshold regression model and a bootstrap to compute its \textit{p}-values. The validity of the bootstrap is established, and its finite sample property is explored through Monte Carlo…

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Estimating causal effects with optimization-based methods: A review and empirical comparison

基于优化的因果效应估计方法:综述与实证比较

In the absence of randomized controlled and natural experiments, it is necessary to balance the distributions of (observable) covariates of the treated and control groups in order to obtain an unbiased estimate of a causal effect of interest; otherwise, a different effect size may be estimated, and incorrect recommendations may be given. To achieve this balance, there exist a wide variety of methods. In particular, several methods based on optimization models have been…

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