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Variational autoencoder for inference of nonlinear mixed effect models based on ordinary differential equations

基于常微分方程的非线性混合效应模型的变分自编码器推断

We propose a variational autoencoder (VAE) approach for parameter estimation in nonlinear mixed-effects models based on ordinary differential equations (NLME-ODEs) using longitudinal data from multiple subjects. In moderate dimensions, likelihood-based inference via the stochastic approximation EM algorithm (SAEM) is widely used, but it relies on Markov Chain Monte-Carlo (MCMC) to approximate subject-specific posteriors. As model complexity increases or observations per…

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Estimating Interventional Distributions with Uncertain Causal Graphs through Meta-Learning

通过元学习估计因果图不确定时的干预分布

In scientific domains -- from biology to the social sciences -- many questions boil down to \textit{What effect will we observe if we intervene on a particular variable?} If the causal relationships (e.g.~a causal graph) are known, it is possible to estimate the intervention distributions. In the absence of this domain knowledge, the causal structure must be discovered from the available observational data. However, observational data are often compatible with multiple…

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Asymptotic Inference for Rank Correlations

秩相关系数的渐近推断

Kendall's tau and Spearman's rho are widely used tools for measuring dependence. Surprisingly, when it comes to asymptotic inference for these rank correlations, some fundamental results and methods have not yet been developed, in particular for discrete random variables and in the time series case, and concerning variance estimation in general. Consequently, asymptotic confidence intervals are not available. We provide a comprehensive treatment of asymptotic inference for…

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Holistic Multi-Scale Inference of the Leverage Effect: Efficiency under Dependent Microstructure Noise

杠杆效应的整体多尺度推断:相依微观结构噪声下的效率

This paper addresses the long-standing challenge of estimating the leverage effect from high-frequency data contaminated by dependent, non-Gaussian microstructure noise. We depart from the conventional reliance on pre-averaging or volatility "plug-in" methods by introducing a holistic multi-scale framework that operates directly on the leverage effect. We propose two novel estimators: the Subsampling-and-Averaging Leverage Effect (SALE) and the Multi-Scale Leverage Effect…

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Mapping Drivers of Greenness: Spatial Variable Selection for MODIS Vegetation Indices

植被绿度驱动因素的空间变量选择:面向 MODIS 植被指数

Understanding how environmental drivers relate to vegetation condition motivates spatially varying regression models, but estimating a separate coefficient surface for every predictor can yield noisy patterns and poor interpretability when many predictors are irrelevant. Motivated by MODIS vegetation index studies, we examine predictors from spectral bands, productivity and energy fluxes, observation geometry, and land surface characteristics. Because these relationships…

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Triply Robust Panel Estimators

三重稳健面板估计量

This paper studies estimation of causal effects in a panel data setting. We introduce a new estimator, the Triply RObust Panel (TROP) estimator, that combines (i) a flexible model for the potential outcomes based on a low-rank factor structure on top of a two-way-fixed effect specification, with (ii) unit weights intended to upweight units similar to the treated units and (iii) time weights intended to upweight time periods close to the treated time periods. We study the…

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Estimating causal effects of functional treatments with modified functional treatment policies

通过修正函数型处理策略估计函数型处理的因果效应

Functional data are increasingly prevalent in biomedical research. While functional data analysis has been established for decades, causal inference with functional treatments remains largely unexplored. Existing methods typically focus on estimating the causal average dose response functional (ADRF), which requires strong positivity assumptions and offers limited interpretability. In this work, we target a new causal estimand, the modified functional treatment policy…

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Bias-Targeted Nonparametric Balancing for Stable Causal Mediation Analysis

面向稳定因果中介分析的偏差针对性非参数平衡

Influence function (IF)-based estimators are widely used in mediation analysis due to their modeling flexibility, but standard implementations require direct estimation of the distribution functions of the mediator and treatment variables. Since these functions appear in the denominator of IF-based estimators, they can induce significant instability, particularly with continuous mediators. In this work, we propose an alternative implementation of IF-based estimators for both…

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Empirical Bayes Variable Selection with Lasso Statistics in the AMP Framework

AMP框架下基于Lasso统计量的经验贝叶斯变量选择

The Lasso is one of the most ubiquitous methods for variable selection in high-dimensional linear regression and has been studied extensively under different regimes. In a particular asymptotic setup entailing $n/p\to \text{constant}$, an i.i.d.~Gaussian $X$ matrix and linear sparsity, \citet{su2017false} analyzed the Lasso selection path and presented negative results, showing that maintaining small levels of the false discovery proportion comes at a substantial cost in…

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A Causal Machine Learning Framework for Treatment Personalization in Clinical Trials: Application to Ulcerative Colitis

临床试验治疗个性化的因果机器学习框架:溃疡性结肠炎应用

Randomized controlled trials estimate average treatment effects, but treatment response heterogeneity motivates personalized approaches. A critical question is whether statistically detectable heterogeneity translates into improved treatment decisions -- these are distinct questions that can yield contradictory answers. We present a modular causal machine learning framework that evaluates each question separately: permutation importance identifies which features predict…

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Sparsified-Learning for High-Dimensional Heavy-Tailed Locally Stationary Time Series, Concentration and Oracle Inequalities

高维重尾局部平稳时间序列的稀疏学习:集中与预言不等式

Sparse learning is ubiquitous in many machine learning tasks. It aims to regularize the goodness-of-fit objective by adding a penalty term to encode structural constraints on the model parameters. In this paper, we develop a flexible sparse learning framework tailored to high-dimensional heavy-tailed locally stationary time series (LSTS). The data-generating mechanism incorporates a regression function that changes smoothly over time and is observed under noise belonging to…

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Multivariate Causal Effects: a Bayesian Causal Regression Factor Model

多元因果效应:贝叶斯因果回归因子模型

The impact of wildfire smoke on air quality is a growing concern, contributing to air pollution through a complex mixture of chemical species with important implications for public health. While previous studies have primarily focused on its association with total particulate matter (PM2.5), the causal relationship between wildfire smoke and the chemical composition of PM2.5 remains largely unexplored. Exposure to these chemical mixtures plays a critical role in shaping…

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Hyperbolic statistical inference for Treatment Effects with Circular biomarker of astigmatism

圆形散光生物标志物治疗效应的双曲几何统计推断

Circular biomarkers arise naturally in many biomedical applications, particularly in ophthalmology, where angular measurements such as astigmatism are routinely recorded. Similar directional variables also occur in the study of human body rotations, including movements of the hand, waist, neck, and lower limbs. Motivated by a clinical dataset comprising angular measurements of astigmatism induced by two cataract surgery procedures, we propose a novel two-sample testing…

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Beating the Winner's Curse via Inference-Aware Policy Optimization

通过考虑推断的政策优化缓解赢家诅咒

There has been a surge of recent interest in automatically learning policies to target treatment decisions based on rich individual covariates. In addition, practitioners want confidence that the learned policy has better performance than the incumbent policy according to downstream policy evaluation. However, due to the winner's curse -- an issue where the policy optimization procedure exploits prediction errors rather than finding actual improvements -- predicted…

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Bayesian Shrinkage in High-Dimensional VAR Models: A Comparative Study

高维 VAR 模型中的贝叶斯收缩:比较研究

High-dimensional vector autoregressive (VAR) models offer a versatile framework for multivariate time series analysis, yet face critical challenges from over-parameterization and uncertain lag order. In this paper, we systematically compare three Bayesian shrinkage priors (horseshoe, lasso, and normal) and two frequentist regularization approaches (ridge and nonparametric shrinkage) under three carefully crafted simulation scenarios. These scenarios encompass (i) overfitting…

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Identification and Debiased Learning of Causal Effects with General Instrumental Variables

一般工具变量下因果效应的识别与去偏学习

Instrumental variable methods are fundamental to causal inference when treatment assignment is confounded by unobserved variables. In this article, we develop a general nonparametric causal framework for identification and learning with multi-categorical or continuous instrumental variables. Specifically, the mean potential outcomes and the average treatment effect can be identified via a regular weighting function derived from the proposed framework. Leveraging…

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Event-driven type design for clinical trials with recurrent events

复发事件临床试验的事件驱动型设计

It is a common practice in randomized clinical trials with the standard survival outcome to follow patients until a prespecified number of events have been observed, a type of trial known as the event-driven trial. The event-driven design ensures that the target power for a specified type 1 error rate is achieved to detect the target hazard ratio, regardless of the specification of other quantities. To understand the treatment effect for chronic conditions, the analysis of…

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Statistical inference after variable selection in Cox models: A simulation study

Cox 模型变量选择后的统计推断:一项模拟研究

Choosing relevant predictors is central to the analysis of biomedical time-to-event data. Classical frequentist inference, however, presumes that the set of covariates is fixed in advance and does not account for data-driven variable selection. As a consequence, naive post-selection inference may be biased and misleading. In right-censored survival settings, these issues may be further exacerbated by the additional uncertainty induced by censoring. We investigate several…

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Inference under First-Order Degeneracy

一阶退化下的统计推断

We study inference in models where a transformation of parameters exhibits first-order degeneracy -- that is, its gradient is zero or close to zero, making the standard delta method invalid. A leading example is causal mediation analysis, where the indirect effect is a product of coefficients and the gradient degenerates near the origin. In these local regions of degeneracy the limiting behaviors of plug-in estimators depend on nuisance parameters that are not consistently…

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On the Computational Efficiency of Bayesian Additive Regression Trees: An Asymptotic Analysis

贝叶斯加性回归树的计算效率:渐近分析

Bayesian Additive Regression Trees (BART) is a popular Bayesian non-parametric regression model that is commonly used in causal inference and beyond. Its strong predictive performance is supported by well-developed estimation theory, comprising guarantees that its posterior distribution concentrates around the true regression function at optimal rates under various data generative settings and for appropriate prior choices. However, the computational properties of the…

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Causal Data Fusion for Panel Data without a Pre-Intervention Period

缺少干预前时期的面板数据因果融合

Traditional panel-data causal inference frameworks, such as difference-in-differences and synthetic control methods, rely on pre-intervention data to estimate counterfactual means. However, such data may be unavailable in real-world settings when interventions are implemented in response to sudden events, such as public health crises or epidemiological shocks. In this paper, we introduce two data-fusion methods for causal inference from panel data in scenarios where…

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Functional Estimation of the Marginal Likelihood

边际似然函数的泛函估计

We propose a framework for computing, optimizing and integrating with respect to a smooth marginal likelihood in statistical models that involve high-dimensional parameters/latent variables and continuous low-dimensional hyperparameters. The method requires samples from the posterior distribution of the parameters for different values of the hyperparameters on a simulation grid and returns inference on the marginal likelihood defined everywhere on its domain, and on its…

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Assessment of evidence against homogeneity in exhaustive subgroup treatment effect plots

穷尽子组处理效应图中反对同质性的证据评估

Exhaustive subgroup treatment effect plots are constructed by displaying all subgroup treatment effects of interest against subgroup sample size, providing a useful overview of the observed treatment effect heterogeneity in a clinical trial. As in any exploratory subgroup analysis, however, the observed estimates suffer from small sample sizes and multiplicity issues. To facilitate more interpretable exploratory assessments, this paper introduces a computationally efficient…

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Identification and Estimation of Network Models with Nonparametric Unobserved Heterogeneity

具有非参数不可观测异质性的网络模型识别与估计

Homophily based on observables is widespread in networks. Therefore, homophily based on unobservables (fixed effects) is also likely to be an important determinant of the interaction outcomes. Failing to properly account for latent homophily (and other complex forms of unobserved heterogeneity) can result in inconsistent estimators and misleading policy implications. To address this concern, we consider a network model with nonparametric unobserved heterogeneity, leaving the…

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