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Bias Mitigation in Matched Observational Studies with Continuous Treatments: Calipered Non-Bipartite Matching and Bias-Corrected Estimation and Inference

连续处理匹配观察研究的偏差缓解:卡尺非二分匹配与偏差修正推断

In matched observational studies with continuous treatments, individuals with different treatment doses but the same or similar covariate values are paired for causal inference. While inexact covariate matching (i.e., covariate imbalance after matching) is common in practice, previous matched studies with continuous treatments have often overlooked this issue as long as post-matching covariate balance meets certain criteria. Through re-analyzing a matched observational study…

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Variational Causal Inference

变分因果推断

Estimating an individual's potential outcomes under counterfactual treatments is a challenging task for traditional causal inference and supervised learning approaches when the outcome is high-dimensional (e.g. gene expressions, impulse responses, human faces) and covariates are relatively limited. In this case, to construct one's outcome under a counterfactual treatment, it is crucial to leverage individual information contained in its observed factual outcome on top of the…

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Predicting Cellular Responses with Variational Causal Inference and Refined Relational Information

结合变分因果推断与细化关系信息预测细胞响应

Predicting the responses of a cell under perturbations may bring important benefits to drug discovery and personalized therapeutics. In this work, we propose a novel graph variational Bayesian causal inference framework to predict a cell's gene expressions under counterfactual perturbations (perturbations that this cell did not factually receive), leveraging information representing biological knowledge in the form of gene regulatory networks (GRNs) to aid individualized…

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Using Multiple Outcomes to Improve the Synthetic Control Method

利用多个结果变量改进合成控制方法

When there are multiple outcome series of interest, Synthetic Control analyses typically proceed by estimating separate weights for each outcome. In this paper, we instead propose estimating a common set of weights across outcomes, by balancing either a vector of all outcomes or an index or average of them. Under a low-rank factor model, we show that these approaches lead to lower bias bounds than separate weights, and that averaging leads to further gains when the number of…

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Bad estimation, good prediction: the Lasso in dense regimes

糟糕的估计,良好的预测:稠密情形下的 Lasso

For high-dimensional omics data, sparsity-inducing regularization methods such as the Lasso are widely used and often yield strong predictive performance, even in settings when the assumption of sparsity is likely violated. We demonstrate that under a specific dense model, namely the high-dimensional joint latent variable model, the Lasso produces sparse prediction rules with favorable prediction error bounds, even when the underlying regression coefficient vector is not…

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Model-free Methods for Event History Analysis and Efficient Adjustment (PhD Thesis)

事件史分析与高效调整的无模型方法:博士论文

This thesis contains a series of independent contributions to statistics, unified by a model-free perspective. The first chapter elaborates on how a model-free perspective can be used to formulate flexible methods that leverage prediction techniques from machine learning. Mathematical insights are obtained from concrete examples, and these insights are generalized to principles that permeate the rest of the thesis. The second chapter studies the concept of local…

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Harmonized Estimation of Subgroup-Specific Treatment Effects in Randomized Trials: The Use of External Control Data

随机试验亚组处理效应的协调估计:外部对照数据的使用

Subgroup analyses of randomized controlled trials (RCTs) constitute an important component of the drug development process in precision medicine. In particular, subgroup analyses of early-stage trials often influence the design and eligibility criteria of subsequent confirmatory trials and ultimately influence which subpopulations will receive the treatment after regulatory approval. However, subgroup analyses are often complicated by small sample sizes, which leads to…

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Isotonic Mechanism for Exponential Family Estimation in Machine Learning Peer Review

机器学习同行评审中用于指数族估计的保序机制

In 2023, the International Conference on Machine Learning (ICML) required authors with multiple submissions to rank their submissions based on perceived quality. In this paper, we aim to employ these author-specified rankings to enhance peer review in machine learning and artificial intelligence conferences by extending the Isotonic Mechanism to exponential family distributions. This mechanism generates adjusted scores that closely align with the original scores while…

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The Variable Multiple Bandpass Periodic Block Bootstrap for Time Series with Multiple Periodic Correlations

多重周期相关时间序列的可变多重带通周期分块自助法

This work introduces a novel block bootstrap method for time series with multiple periodically correlated (MPC) components called the Variable Multiple Bandpass Periodic Block Bootstrap (VMBPBB). While past methodological advancements permitted bootstrapping time series to preserve certain correlations, and then periodically correlated (PC) structures, there does not appear to be adequate or efficient methods to bootstrap estimate the sampling distribution of estimators for…

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Uniform Kernel Prober

均匀核探测子

The ability to identify useful features or representations of the input data based on training data that achieves low prediction error on test data across multiple prediction tasks is considered the key to multitask learning success. In practice, however, one faces the issue of the choice of prediction tasks and the availability of test data from the chosen tasks while comparing the relative performance of different features. In this work, we develop a class of pseudometrics…

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Power and sample size calculation for multivariate longitudinal trials using the longitudinal rank sum test

基于纵向秩和检验的多变量纵向试验功效与样本量计算

Neurodegenerative diseases such as Alzheimer's and Parkinson's often exhibit complex, multivariate longitudinal outcomes that require advanced statistical methods to comprehensively evaluate treatment efficacy. The Longitudinal Rank Sum Test (LRST) offers a nonparametric framework to assess global treatment effects across multiple longitudinal endpoints without requiring multiplicity corrections. This study develops a robust methodology for power and sample size estimation…

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Augmented two-stage estimation for treatment crossover in oncology trials: Leveraging external data for improved precision

肿瘤试验处理交叉的增强两阶段估计:利用外部数据提高精度

Randomized controlled trials (RCTs) in oncology often allow control group participants to crossover to experimental treatments, a practice that, while often ethically necessary, complicates the accurate estimation of long-term treatment effects. When crossover rates are high or sample sizes are limited, commonly used methods for crossover adjustment (such as the rank-preserving structural failure time model, inverse probability of censoring weights, and two-stage estimation…

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Shapley-PC: Constraint-based Causal Structure Learning with a Shapley Inspired Framework

Shapley-PC:受 Shapley 值启发的约束型因果结构学习

Causal Structure Learning (CSL), also referred to as causal discovery, amounts to extracting causal relations among variables in data. CSL enables the estimation of causal effects from observational data alone, avoiding the need to perform real life experiments. Constraint-based CSL leverages conditional independence tests to perform causal discovery. We propose Shapley-PC, a novel method to improve constraint-based CSL algorithms by using Shapley values over the possible…

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Analysis of Two-Stage Rollout Designs with Clustering for Causal Inference under Network Interference

网络干扰下带聚类的两阶段逐步投放实验设计分析

Estimating causal effects under interference is pertinent to many real-world settings. Recent work with low-order potential outcomes models uses a rollout design to obtain unbiased estimators that require no interference network information. However, the required extrapolation can lead to prohibitively high variance. To address this, we propose a two-stage experiment that selects a sub-population in the first stage and restricts treatment rollout to this sub-population in…

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Comment on "Generic machine learning inference on heterogeneous treatment effects in randomized experiments."

评《随机实验中异质处理效应的通用机器学习推断》

We analyze the split-sample robust inference (SSRI) methodology proposed by Chernozhukov, Demirer, Duflo, and Fernandez-Val (CDDF) for quantifying uncertainty in heterogeneous treatment effect estimation. While SSRI effectively accounts for randomness in data splitting, its computational cost can be prohibitive when combined with complex machine learning (ML) models. We present an alternative randomization inference (RI) approach that maintains SSRI's generality without…

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Covariates-Adjusted Mixed-Membership Estimation: A Novel Network Model with Optimal Guarantees

协变量调整的混合成员估计:网络模型与最优保证

This paper addresses the problem of mixed-membership estimation in networks, where the goal is to efficiently estimate the latent mixed-membership structure from the observed network. Recognizing the widespread availability and valuable information carried by node covariates, we propose a novel network model that incorporates both community information, as represented by the Degree-Corrected Mixed Membership (DCMM) model, and node covariate similarities to determine…

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Factor Modelling for Biclustering Large-dimensional Matrix-valued Time Series

用于高维矩阵时间序列双聚类的因子建模

A novel unsupervised learning method is proposed in this paper for biclustering large-dimensional matrix-valued time series based on an entirely new latent two-way factor structure. Each block cluster is characterized by its own row and column cluster-specific factors in addition to some common matrix factors which impact on all the matrix time series. We first estimate the global loading spaces by projecting the observation matrices onto the row or column loading space…

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On the Parameter Identifiability of Partially Observed Linear Causal Models

部分观测线性因果模型的参数可识别性

Linear causal models are important tools for modeling causal dependencies and yet in practice, only a subset of the variables can be observed. In this paper, we examine the parameter identifiability of these models by investigating whether the edge coefficients can be recovered given the causal structure and partially observed data. Our setting is more general than that of prior research - we allow all variables, including both observed and latent ones, to be flexibly…

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Adversarial Transform Particle Filters

对抗变换粒子滤波

The particle filter (PF) and the ensemble Kalman filter (EnKF) are widely used for approximate inference in state-space models. From a Bayesian perspective, these algorithms represent the prior by an ensemble of particles and update it to the posterior with new observations over time. However, the PF often suffers from weight degeneracy in high-dimensional settings, whereas the EnKF relies on linear Gaussian assumptions that can introduce significant approximation errors. In…

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Online Experimental Design With Estimation-Regret Trade-off Under Network Interference

网络干扰下兼顾估计精度与遗憾的在线实验设计

Network interference has attracted significant attention in the field of causal inference, encapsulating various sociological behaviors where the treatment assigned to one individual within a network may affect the outcomes of others, such as their neighbors. A key challenge in this setting is that standard causal inference methods often assume independent treatment effects among individuals, which may not hold in networked environments. To estimate interference-aware causal…

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A Response to Recent Critiques of Hainmueller, Mummolo and Xu (2019) on Estimating Conditional Relationships

回应关于估计条件关系的近期批评:对 Hainmueller、Mummolo 与 Xu(2019)的澄清

Simonsohn (2024a) and Simonsohn (2024b) critique Hainmueller, Mummolo and Xu (2019, HMX), arguing that failing to model nonlinear relationships between the treatment and moderator leads to biased marginal effect estimates and uncontrolled Type-I error rates. While these critiques highlight the issue of under-modeling nonlinearity in applied research, they are fundamentally flawed in several key ways. First, the causal estimand for interaction effects and the necessary…

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Pairwise Valid Instruments

成对有效的工具变量

Finding valid instruments is difficult. We propose Validity Set Instrumental Variable (VSIV) estimation, a method for estimating local average treatment effects (LATEs) in heterogeneous causal effect models when the instruments are partially invalid. We consider settings with pairwise valid instruments, that is, instruments that are valid for a subset of instrument value pairs. VSIV estimation exploits testable implications of instrument validity to remove invalid pairs and…

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Pulling back the curtain: the road from statistical estimand to machine-learning based estimator for epidemiologists (no wizard required)

从统计目标量到机器学习估计量:面向流行病学研究者的推导指南

Epidemiologists increasingly use causal inference methods that rely on machine learning, as these approaches can relax unnecessary model specification assumptions. While deriving and studying asymptotic properties of such estimators is a task usually associated with statisticians, it is useful for epidemiologists to understand the steps involved, as epidemiologists are often at the forefront of defining important new research questions and translating them into new…

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Order selection in GARMA models for count time series: a Bayesian perspective

计数时间序列 GARMA 模型的贝叶斯阶数选择

Estimation in GARMA models has traditionally been carried out under the frequentist approach. To date, Bayesian approaches for such estimation have been relatively limited. In the context of GARMA models for count time series, Bayesian estimation achieves satisfactory results in terms of point estimation. Model selection in this context often relies on the use of information criteria. Despite its prominence in the literature, the use of information criteria for model…

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