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贝叶斯:贝叶斯建模、后验推断与 MCMC。
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BNPqte: A Bayesian Nonparametric Approach to Causal Inference on Quantiles in R

BNPqte:用于分位数因果推断的贝叶斯非参数 R 实现

In this article, we introduce the BNPqte R package which implements the Bayesian nonparametric approach of Xu, Daniels and Winterstein (2018) for estimating quantile treatment effects in observational studies. This approach provides flexible modeling of the distributions of potential outcomes, so it is capable of capturing a variety of underlying relationships among the outcomes, treatments and confounders and estimating multiple quantile treatment effects simultaneously.…

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Hierarchical surrogate-based Approximate Bayesian Computation for an electric motor test bench

电机试验台的分层代理模型近似贝叶斯计算

Inferring parameter distributions of complex industrial systems from noisy time series data requires methods to deal with the uncertainty of the underlying data and the used simulation model. Bayesian inference is well suited for these uncertain inverse problems. Standard methods used to identify uncertain parameters are Markov Chain Monte Carlo (MCMC) methods with explicit evaluation of a likelihood function. However, if the likelihood is very complex, such that its…

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Markov Equivalence of Max-Linear Bayesian Networks

最大线性贝叶斯网络的马尔可夫等价性

Max-linear Bayesian networks have emerged as highly applicable models for causal inference via extreme value data. However, conditional independence (CI) for max-linear Bayesian networks behaves differently than for classical Gaussian Bayesian networks. We establish the parallel between the two theories via tropicalization, and establish the surprising result that the Markov equivalence classes for max-linear Bayesian networks coincide with the ones obtained by regular CI.…

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An Interpretable Neural Network for Parameter Inference

用于参数推断的可解释神经网络

Adoption of deep neural networks in fields such as economics or finance has been constrained by the lack of interpretability of model outcomes. This paper proposes a generative neural network architecture - the parameter encoder neural network (PENN) - capable of estimating local posterior distributions for the parameters of a regression model. The parameters fully explain predictions in terms of the inputs and permit visualization, interpretation and inference in the…

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Automatically Differentiable Random Coefficient Logistic Demand Estimation

可自动微分的随机系数 Logit 需求估计

We show how the random coefficient logistic demand (BLP) model can be phrased as an automatically differentiable moment function, including the incorporation of numerical safeguards proposed in the literature. This allows gradient-based frequentist and quasi-Bayesian estimation using the Continuously Updating Estimator (CUE). Drawing from the machine learning literature, we outline hitherto under-utilized best practices in both frequentist and Bayesian estimation techniques.…

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Vector autoregression models with skewness and heavy tails

具有偏度与厚尾的向量自回归模型

With uncertain changes of the economic environment, macroeconomic downturns during recessions and crises can hardly be explained by a Gaussian structural shock. There is evidence that the distribution of macroeconomic variables is skewed and heavy tailed. In this paper, we contribute to the literature by extending a vector autoregression (VAR) model to account for a more realistic assumption of the multivariate distribution of the macroeconomic variables. We propose a…

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Approximating the Operating Characteristics of Bayesian Uncertainty Directed Trial Designs

贝叶斯不确定性导向试验设计运行特征的近似

Bayesian response adaptive clinical trials are currently evaluating experimental therapies for several diseases. Adaptive decisions, such as pre-planned variations of the randomization probabilities, attempt to accelerate the development of new treatments. The design of response adaptive trials, in most cases, requires time consuming simulation studies to describe operating characteristics, such as type I/II error rates, across plausible scenarios. We investigate large…

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Bayesian hierarchical stacking: Some models are (somewhere) useful

贝叶斯层级堆叠:某些模型在某些区域有用

Stacking is a widely used model averaging technique that asymptotically yields optimal predictions among linear averages. We show that stacking is most effective when model predictive performance is heterogeneous in inputs, and we can further improve the stacked mixture with a hierarchical model. We generalize stacking to Bayesian hierarchical stacking. The model weights are varying as a function of data, partially-pooled, and inferred using Bayesian inference. We further…

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A flexible Bayesian non-confounding spatial model for analysis of dispersed count data in clinical studies

用于临床离散度计数数据分析的灵活贝叶斯非混杂空间模型

In employing spatial regression models for counts, we usually meet two issues. First, ignoring the inherent collinearity between covariates and the spatial effect would lead to causal inferences. Second, real count data usually reveal over or under-dispersion where the classical Poisson model is not appropriate to use. We propose a flexible Bayesian hierarchical modeling approach by joining non-confounding spatial methodology and a newly reconsidered dispersed count modeling…

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Improving Adaptive Seamless Designs through Bayesian optimization

通过贝叶斯优化改进自适应无缝试验设计

We propose to use Bayesian optimization (BO) to improve the efficiency of the design selection process in clinical trials. BO is a method to optimize expensive black-box functions, by using a regression as a surrogate to guide the search. In clinical trials, planning test procedures and sample sizes is a crucial task. A common goal is to maximize the test power, given a set of treatments, corresponding effect sizes, and a total number of samples. From a wide range of…

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Uncertain Neighbors: Bayesian Propensity Score Matching For Causal Inference

不确定的近邻:用于因果推断的贝叶斯倾向得分匹配

We compare the performance of standard nearest-neighbor propensity score matching with that of an analogous Bayesian propensity score matching procedure. We show that the Bayesian approach makes better use of available information, as it makes less arbitrary decisions about which observations to drop and which ones to keep in the matched sample. We conduct a simulation study to evaluate the performance of standard and Bayesian nearest-neighbor matching when matching is done…

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A model of inter-organizational network formation

组织间网络形成模型

How do inter-organizational networks emerge? Accounting for interdependence among ties while studying tie formation is one of the key challenges in this area of research. We address this challenge using an equilibrium framework where firms' decisions to form links with other firms are modeled as a strategic game. In this game, firms weigh the costs and benefits of establishing a relationship with other firms and form ties if their net payoffs are positive. We characterize…

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Semi-supervised empirical Bayes group-regularized factor regression

半监督经验贝叶斯分组正则化因子回归

The features in high dimensional biomedical prediction problems are often well described with lower dimensional manifolds. An example is genes that are organised in smaller functional networks. The outcome can then be described with the factor regression model. A benefit of the factor model is that is allows for straightforward inclusion of unlabeled observations in the estimation of the model, i.e., semi-supervised learning. In addition, the high dimensional features in…

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Revisiting the empirical fundamental relationship of traffic flow for highways using a causal econometric approach

用因果计量方法重新估计高速公路交通流基本关系

The fundamental relationship of traffic flow is empirically estimated by fitting a regression curve to a cloud of observations of traffic variables. Such estimates, however, may suffer from the confounding/endogeneity bias due to omitted variables such as driving behaviour and weather. To this end, this paper adopts a causal approach to obtain an unbiased estimate of the fundamental flow-density relationship using traffic detector data. In particular, we apply a Bayesian…

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Objective Bayesian meta-analysis based on generalized multivariate random effects model

基于广义多元随机效应模型的客观贝叶斯元分析

Objective Bayesian inference procedures are derived for the parameters of the multivariate random effects model generalized to elliptically contoured distributions. The posterior for the overall mean vector and the between-study covariance matrix is deduced by assigning two noninformative priors to the model parameter, namely the Berger and Bernardo reference prior and the Jeffreys prior, whose analytical expressions are obtained under weak distributional assumptions. It is…

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An Improved and Extended Bayesian Synthetic Control

改进与扩展的贝叶斯合成控制

An improved and extended Bayesian synthetic control model is presented, expanding upon the latent factor model in Tuomaala 2019. The changes we make include 1) standardization of the data prior to model fit - which improves efficiency and generalization across different data sets; 2) adding time varying covariates; 3) adding the ability to have multiple treated units; 4) fitting the latent factors within the Bayesian model; and, 5) a sparsity inducing prior to automatically…

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Bayesian Optimal Experimental Design for Inferring Causal Structure

用于推断因果结构的贝叶斯最优实验设计

Inferring the causal structure of a system typically requires interventional data, rather than just observational data. Since interventional experiments can be costly, it is preferable to select interventions that yield the maximum amount of information about a system. We propose a novel Bayesian method for optimal experimental design by sequentially selecting interventions that minimize the expected posterior entropy as rapidly as possible. A key feature is that the method…

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Incorporating External Data into the Analysis of Clinical Trials via Bayesian Additive Regression Trees

利用贝叶斯加性回归树将外部数据纳入临床试验分析

Most clinical trials involve the comparison of a new treatment to a control arm (e.g., the standard of care) and the estimation of a treatment effect. External data, including historical clinical trial data and real-world observational data, are commonly available for the control arm. Borrowing information from external data holds the promise of improving the estimation of relevant parameters and increasing the power of detecting a treatment effect if it exists. In this…

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Bayesian Model Averaging for Causality Estimation and its Approximation based on Gaussian Scale Mixture Distributions

因果效应估计的贝叶斯模型平均及高斯尺度混合近似

In the estimation of the causal effect under linear Structural Causal Models (SCMs), it is common practice to first identify the causal structure, estimate the probability distributions, and then calculate the causal effect. However, if the goal is to estimate the causal effect, it is not necessary to fix a single causal structure or probability distributions. In this paper, we first show from a Bayesian perspective that it is Bayes optimal to weight (average) the causal…

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Factor-augmented Bayesian treatment effects models for panel outcomes

面板结局的因子增广贝叶斯处理效应模型

We propose a new, flexible model for inference of the effect of a binary treatment on a continuous outcome observed over subsequent time periods. The model allows to seperate association due to endogeneity of treatment selection from additional longitudinal association of the outcomes and hence unbiased estimation of dynamic treatment effects. We investigate the performance of the proposed method on simulated data and employ it to reanalyse data on the longitudinal effects…

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General Bayesian time-varying parameter VARs for predicting government bond yields

用于政府债券收益率预测的一般贝叶斯时变参数 VAR

Time-varying parameter (TVP) regressions commonly assume that time-variation in the coefficients is determined by a simple stochastic process such as a random walk. While such models are capable of capturing a wide range of dynamic patterns, the true nature of time variation might stem from other sources, or arise from different laws of motion. In this paper, we propose a flexible TVP VAR that assumes the TVPs to depend on a panel of partially latent covariates. The latent…

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Exploring the space-time pattern of log-transformed infectious count of COVID-19: a clustering-segmented autoregressive sigmoid model

新冠感染计数的时空模式:聚类分段自回归 S 形曲线模型

At the end of April 20, 2020, there were only a few new COVID-19 cases remaining in China, whereas the rest of the world had shown increases in the number of new cases. It is of extreme importance to develop an efficient statistical model of COVID-19 spread, which could help in the global fight against the virus. We propose a clustering-segmented autoregressive sigmoid (CSAS) model to explore the space-time pattern of the log-transformed infectious count. Four key…

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Approximate Bayes factors for unit root testing

单位根检验的近似贝叶斯因子

This paper introduces a feasible and practical Bayesian method for unit root testing in financial time series. We propose a convenient approximation of the Bayes factor in terms of the Bayesian Information Criterion as a straightforward and effective strategy for testing the unit root hypothesis. Our approximate approach relies on few assumptions, is of general applicability, and preserves a satisfactory error rate. Among its advantages, it does not require the prior…

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Identification and Inference Under Narrative Restrictions

叙事约束下的识别与推断

We consider structural vector autoregressions subject to 'narrative restrictions', which are inequality restrictions on functions of the structural shocks in specific periods. These restrictions raise novel problems related to identification and inference, and there is currently no frequentist procedure for conducting inference in these models. We propose a solution that is valid from both Bayesian and frequentist perspectives by: 1) formalizing the identification problem…

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