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贝叶斯:贝叶斯建模、后验推断与 MCMC。
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Bayesian Bridge Gaussian Process Regression

贝叶斯桥高斯过程回归

The performance of Gaussian Process (GP) regression is often hampered by the curse of dimensionality, which inflates computational cost and reduces predictive power in high-dimensional problems. Variable selection is thus crucial for building efficient and accurate GP models. Inspired by Bayesian bridge regression, we propose the Bayesian Bridge Gaussian Process Regression (B\textsuperscript{2}GPR) model. This framework places $\ell_q$-norm constraints on key GP parameters…

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Bayesian Semiparametric Causal Inference: Targeted Doubly Robust Estimation of Treatment Effects

贝叶斯半参数因果推断:处理效应的目标化双重稳健估计

We propose a semiparametric Bayesian methodology for estimating the average treatment effect (ATE) within the potential outcomes framework using observational data with high-dimensional nuisance parameters. Our method introduces a Bayesian debiasing procedure that corrects for bias arising from nuisance estimation and employs a targeted modeling strategy based on summary statistics rather than the full data. These summary statistics are identified in a debiased manner,…

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On robust Bayesian causal inference

稳健贝叶斯因果推断

This paper develops a Bayesian framework for robust causal inference from longitudinal observational data. Many contemporary methods rely on structural assumptions, such as factor models, to adjust for unobserved confounding, but they can lead to biased causal estimands when mis-specified. We focus on directly estimating time--unit--specific causal effects and use generalised Bayesian inference to quantify model mis-specification and adjust for it, while retaining…

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BaGGLS: A Bayesian Shrinkage Framework for Interpretable Modeling of Interactions in High-Dimensional Biological Data

BaGGLS:高维生物数据交互可解释建模的贝叶斯收缩框架

Biological data sets are often high-dimensional, noisy, and governed by complex interactions among sparse signals. This poses major challenges for interpretability and reliable feature selection. Tasks such as identifying motif interactions in genomics exemplify these difficulties, as only a small subset of biologically relevant features (e.g., motifs) are typically active, and their effects are often non-linear and context-dependent. While statistical approaches often…

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Consistent Group selection using Global-local prior in High dimensional setup

高维分组模型选择中的全局-局部先验一致性方法

We consider the problem of model selection when grouping structure is inherent within the regressors. Using a Bayesian approach, we model the mean vector by a one-group global-local shrinkage prior belonging to a broad class of such priors that includes the horseshoe prior. In the context of variable selection, this class of priors was studied by Tang et al. (2018). A modified form of the usual class of global-local shrinkage priors with polynomial tail on the group…

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A Bayesian INLA-SPDE Approach to Spatio-Temporal Point-Grid Fusion with Change-of-Support and Misaligned Covariates

贝叶斯 INLA-SPDE 时空点-网格数据融合:支撑变化与协变量错位

We propose a spatio-temporal data-fusion framework for point data and gridded data with variables observed on different spatial supports. A latent Gaussian field with a Matérn-SPDE prior provides a continuous space representation, while source-specific observation operators map observations to both point measurements and gridded averages, addressing change-of-support and covariate misalignment. Additionally incorporating temporal dependence enables prediction at unknown…

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Bayesian Causal Discovery with Cycles and Latent Confounders

允许因果循环与潜在混杂的贝叶斯因果发现

Learning causality from observational data has received increasing interest across various scientific fields. However, most existing methods assume the absence of latent confounders and restrict the underlying causal graph to be acyclic, assumptions that are often violated in many real-world applications. In this paper, we address these challenges by proposing a novel framework for causal discovery that accommodates both cycles and latent confounders. By leveraging the…

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Selecting valid adjustment sets with uncertain causal graphs

因果图不确定时的有效调整集选择

Precise knowledge of causal directed acyclic graphs (DAGs) is assumed for standard approaches towards valid adjustment set selection for unbiased estimation, but in practice, the DAG is often inferred from data or expert knowledge, introducing uncertainty. We present techniques to identify valid adjustment sets despite potential errors in the estimated causal graph. Specifically, we assume that only the skeleton of the DAG is known. Under a Bayesian framework, we place a…

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Optimal and computationally tractable lower bounds for logistic log-likelihoods

logistic 对数似然的最优且可计算下界

The logit transform is arguably the most widely-employed link function beyond linear settings. This transformation routinely appears in regression models for binary data and provides a central building-block in popular methods for both classification and regression. Its widespread use, combined with the lack of analytical solutions for the optimization of objective functions involving the logit transform, still motivates active research in computational statistics. Among the…

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Valid and efficient possibilistic structure learning in Gaussian linear regression

高斯线性回归中有效且可能性的结构学习

A crucial step in fitting a regression model to data is determining the model's structure, i.e., the subset of explanatory variables to be included. However, the uncertainty in this step is often overlooked due to a lack of satisfactory methods. Frequentists have no broadly applicable confidence set constructions for a model's structure, and Bayesian posterior credible sets do not achieve the desired finite-sample coverage. In this paper, we propose an extension of the…

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Convergence Rate of Efficient MCMC with Ancillarity-Sufficiency Interweaving Strategy for Panel Data Models

面板数据模型中辅助性—充分性交织 MCMC 的收敛速率

Improving Markov chain Monte Carlo algorithm efficiency is essential for enhancing computational speed and inferential accuracy in Bayesian analysis. These improvements can be effectively achieved using the ancillarity-sufficiency interweaving strategy (ASIS), an effective means of achieving such gains. Herein, we provide the first rigorous theoretical justification for applying ASIS in Bayesian hierarchical panel data models. Asymptotic analysis demonstrated that when the…

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rfBLT: Random Feature Bayesian Lasso Takens Model for time series forecasting

rfBLT:用于时间序列预测的随机特征贝叶斯 Lasso Takens 模型

Time series prediction is challenging due to our limited understanding of the underlying dynamics. Conventional models such as ARIMA and Holt's linear trend model experience difficulty in identifying nonlinear patterns in time series. In contrast, machine learning models excel at learning complex patterns and handling high-dimensional data; however, they are unable to quantify the uncertainty associated with their predictions, as statistical models do. To overcome these…

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Bayesian design and analysis of two-arm cluster randomised trials using assurance: extension to binary outcomes and comparison of MCMC and INLA

基于保证概率的两组整群随机试验贝叶斯设计:二元结果及 MCMC 与 INLA 比较

The paper considers two different designs; a two-arm superiority cluster randomised controlled trial (RCT) with a continuous outcome, and a twoarm superiority cluster RCT with a binary outcome. From a Bayesian perspective, for the analysis of the trial we use a (generalised) linear mixed effects model. We summarise the inference for the treatment effect for a cluster RCT based on the posterior distribution. Based on this inference we use assurance to choose the sample size.…

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Going With the Flow: Normalizing Flows for Gaussian Process Regression under Hierarchical Shrinkage Priors

分层收缩先验下高斯过程回归的归一化流方法

Gaussian Process Regression (GPR) is a powerful tool for nonparametric regression, but its application in a fully Bayesian fashion in high-dimensional settings is hindered by two primary challenges: the difficulty of variable selection and the computational burden, which is particularly acute in fully Bayesian inference. This paper introduces a novel methodology that combines hierarchical global-local shrinkage priors with normalizing flows to address these challenges. The…

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Breaking the Winner's Curse with Bayesian Hybrid Shrinkage

用贝叶斯混合收缩缓解赢家诅咒

A 'Winner's Curse' arises in large-scale online experimentation platforms when the same experiments are used to both select treatments and evaluate their effects. In these settings, classical difference-in-means estimators of treatment effects are upwardly biased and conventional confidence intervals are rendered invalid. The bias scales with the magnitude of sampling variability and the selection threshold, and inversely with the treatment's true effect size. We propose a…

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Multilevel non-linear interrupted time series analysis

多层非线性中断时间序列分析

Recent advances in interrupted time series analysis permit characterization of a typical non-linear interruption effect through use of generalized additive models. Concurrently, advances in latent time series modeling allow efficient Bayesian multilevel time series models. We propose to combine these concepts with a hierarchical model selection prior to characterize interruption effects with a multilevel structure, encouraging parsimony and partial pooling while…

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Generative Bayesian Filtering and Parameter Learning

生成式贝叶斯滤波与参数学习

Generative Bayesian Filtering (GBF) provides a powerful and flexible framework for performing posterior inference in complex nonlinear and non-Gaussian state-space models. Our approach extends Generative Bayesian Computation (GBC) to dynamic settings, enabling recursive posterior inference using simulation-based methods powered by deep neural networks. GBF does not require explicit density evaluations, making it particularly effective when observation or transition…

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Robust and consistent model evaluation criteria in high-dimensional regression

高维回归中稳健且一致的模型评价准则

Most of the regularization methods such as the LASSO have one (or more) regularization parameter(s), and to select the value of the regularization parameter is essentially equal to select a model. Thus, to obtain a model suitable for the data and phenomenon, we need to determine an adequate value of the regularization parameter. Regarding the determination of the regularization parameter in the linear regression model, we often apply the information criteria like the AIC and…

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Bayesian Causal Effect Estimation for Categorical Data using Staged Tree Models

利用分阶段树模型进行分类数据的贝叶斯因果效应估计

We propose a fully Bayesian approach for causal inference with multivariate categorical data based on staged tree models, a class of probabilistic graphical models capable of representing asymmetric and context-specific dependencies. To account for uncertainty in both structure and parameters, we introduce a flexible family of prior distributions over staged trees. These include product partition models to encourage parsimony, a novel distance-based prior to promote…

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High-dimensional regression with outcomes of mixed-type using the multivariate spike-and-slab LASSO

混合类型结果的高维回归:多元 spike-and-slab LASSO

We consider a high-dimensional multi-outcome regression in which $q,$ possibly dependent, binary and continuous outcomes are regressed onto $p$ covariates. We model the observed outcome vector as a partially observed latent realization from a multivariate linear regression model. Our goal is to estimate simultaneously a sparse matrix ($B$) of latent regression coefficients (i.e., partial covariate effects) and a sparse latent residual precision matrix ($Ω$), which induces…

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Bayesian copula-based spatial random effects models for inference with complex spatial data

基于贝叶斯Copula的空间随机效应模型:面向复杂空间数据的推断

In this article, we develop fully Bayesian, copula-based, spatial-statistical models for large, noisy, incomplete, and non-Gaussian spatial data. Our approach includes novel constructions of copulas that accommodate a spatial-random-effects structure, enabling low-rank representations and computationally efficient Bayesian inference. The spatial copula is used in a latent process model of the Bayesian hierarchical spatial-statistical model, and, conditional on the latent…

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Bayesian shrinkage priors for penalized synthetic control estimators in the presence of spillovers

存在溢出效应时惩罚合成控制估计的贝叶斯收缩先验

Synthetic control (SC) methods are widely used to estimate the effects of policy interventions, especially those targeting specific geographic regions, referred to as units. These methods construct a weighted combination of untreated units, forming a "synthetic" control that approximates the counterfactual outcomes of the treated unit had the intervention not occurred. Although neighboring areas are often selected as controls due to their similarity in observed and…

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Characterizing the Effects of Environmental Exposures on Social Mobility: Bayesian Semi-parametrics for Principal Stratification

环境暴露对社会流动的影响:主分层的贝叶斯半参数方法

Understanding the causal effects of air pollution exposures on social mobility is attracting increasing attention. At the same time, education is widely recognized as a key driver of social mobility. However, the causal pathways linking fine particulate matter (PM2.5) exposure, educational attainment, and social mobility remain largely unexplored. To address this, we adopt the principal stratification approach, which rigorously defines causal effects when a post-treatment…

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Type 2 Tobit Sample Selection Models with Bayesian Additive Regression Trees

结合贝叶斯加性回归树的第二类Tobit样本选择模型

This paper introduces Type 2 Tobit Bayesian Additive Regression Trees (TOBART-2). BART can produce accurate individual-specific treatment effect estimates. However, in practice estimates are often biased by sample selection. We extend the Type 2 Tobit sample selection model to account for nonlinearities and model uncertainty by including sums of trees in both the selection and outcome equations. A Dirichlet Process Mixture distribution for the error terms allows for…

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