Efficient Bayesian Estimation of Dynamic Structural Equation Models via State Space Marginalization
通过状态空间边际化高效进行动态结构方程模型的贝叶斯估计AI 解读 ↓
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通过状态空间边际化高效进行动态结构方程模型的贝叶斯估计AI 解读 ↓
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Dynamic structural equation models (DSEMs) combine time-series modeling of within-person processes with hierarchical modeling of between-person differences and differences between timepoints, and have become very popular for the analysis of intensive longitudinal data in the social sciences. An important computational bottleneck has, however, still not been resolved: whenever the underlying process is assumed to be latent and measured by one or more indicators per timepoint, currently published algorithms rely on inefficient brute-force Markov chain Monte Carlo sampling which scales poorly as the number of timepoints and participants increases and results in highly correlated samples. The main result of this paper shows that the within-level part of any DSEM can be reformulated as a linear Gaussian state space model. Consequently, the latent states can be analytically marginalized using a Kalman filter, allowing for highly efficient estimation via Hamiltonian Monte Carlo. This makes estimation of DSEMs computationally tractable for much larger datasets -- both in terms of timepoints and participants -- than what has been previously possible. We demonstrate the proposed algorithm in several simulation experiments, showing it can be orders of magnitude more efficient than standard Metropolis-within-Gibbs approaches.
迭代边际化贝叶斯映射进行似然最大化及其非线性面板模型应用
Complex dynamic systems can be investigated by fitting mechanistic stochastic dynamic models to time series data. In this context, commonly used Monte Carlo inference procedures for model selection and parameter estimation quickly become computationally unfeasible as the system dimension grows. The increasing prevalence of panel data, characterized by multiple related time series, therefore necessitates the development of inference algorithms that are effective for this…
多潜变量模型的快速精确变分推断
Models with a large number of latent variables are often used to utilize the information in big or complex data, but can be difficult to estimate. Variational inference methods provide an attractive solution. These methods use an approximation to the posterior density, yet for large latent variable models existing choices can be inaccurate or slow to calibrate. Here, we propose a family of tractable variational approximations that are more accurate and faster to calibrate…
计数时间序列参数驱动模型的辅助混合抽样及状态空间应用
We consider parameter-driven models of time series of counts, where the observations are assumed to arise from a Poisson distribution with a mean changing over time according to a latent process. Estimation of these models is carried out within a Bayesian framework using data augmentation and Markov chain Monte Carlo methods. We suggest a new auxiliary mixture sampler, which possesses a Gibbsian transition kernel, where we draw from full conditional distributions belonging…
含随机效应与 AR(1) 误差的纵向数据模型
For longitudinal data on several individuals, linear models that contain both random effects across individuals and autocorrelation in the within-individual errors are studied. A score test for autocorrelation in the within-individual errors for the “conditional independence” random effects model is first developed. An explicit maximum likelihood estimation procedure using the scoring method for the model with random effects and (autoregressive) AR(1) errors is then derived.…
动态潜在类别结构方程模型:密集纵向数据建模实操教程
In this tutorial, we provide a hands-on guideline on how to implement complex Dynamic Latent Class Structural Equation Models (DLCSEM) in the Bayesian software JAGS. We provide building blocks starting with simple Confirmatory Factor and Time Series analysis, and then extend these blocks to Multilevel Models and Dynamic Structural Equation Models (DSEM). Subsequently, we introduce Hidden Markov Switching Models (HMSM) and demonstrate their integration with DSEM to yield…
将 Prais–Winsten 回归扩展至高阶自回归误差面板:模拟研究
We extend the Prais-Winsten AR(k) generalized least squares (GLS) transformation to panel data within the Beck-Katz panel-corrected standard error (PCSE) framework and implement the method in the community-contributed Stata package xtpraisk. As the panel extension of Prais-Winsten, xtpraisk is the natural comparator to xtscc, the panel extension of Newey-West and implementation of the Driscoll-Kraay estimator. We conduct a Monte Carlo simulation to validate the statistical…