Pattern-Based Sequential Multiple Imputation for Missing Data in Clinical Trials: An Extension for Baseline-Only Early Dropout Subjects
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Under the ICH E9 (R1) addendum, treatment policy strategies for intercurrent events target the treatment effect regardless of treatment discontinuation. Sequential multiple imputation (MI) models that condition each visit's imputation on discontinuation status or pattern reduce bias relative to mixed models and standard MI, but require every subject to contribute at least one post-baseline observation, an assumption violated by subjects who withdraw before any post-baseline assessment, a baseline-only early dropout pattern common in chronic-disease trials. We propose Extended Pattern-based Sequential Multiple Imputation (EPSMI), which reconstructs missing data for baseline-only early dropouts using covariate-matched, same-arm donors before applying an extended discontinuation-pattern indicator within eight sequential MI models. Two strategies were evaluated: EPSMI-Full, imputing the entire post-baseline trajectory from a donor, and EPSMI-Y1, imputing only the first visit and leaving later visits to the pattern-extended MI engine. A simulation study grounded in published Sjogren's syndrome trials evaluated bias, coverage, precision, power, and Type I error across 24 scenarios, comparing EPSMI against MMRM, standard MI, and sequential MI after excluding early dropouts (No Early). Under random early dropout, both EPSMI strategies reduced bias relative to No Early. Under informative early dropout the strategies diverged: EPSMI-Y1 remained robust, matching or exceeding No Early coverage with only mild Type I error inflation, whereas EPSMI-Full's deterministic reconstruction produced larger bias, narrower intervals from underestimated variance, lower coverage, and clear Type I error inflation. EPSMI-Y1 is recommended as the primary analysis strategy for baseline-only early dropout, keeping estimation faithful to the treatment policy estimand over the full randomized population.
Background: Generalized Odds (Gen Odds) provide summaries for ordinal outcomes without requiring the proportional odds assumption. However, conventional Gen Odds compares independently drawn treatment and control outcomes and targets a population-level contrast rather than an individual-level contrast. We developed an individual-level causal formulation of Gen Odds and examined its identification. Methods: We defined the Causal Gen Odds using the joint distribution of…
We develop a semiparametric continuous time inferential framework for testing cumulative treatment effects, including both immediate and carryover effects. The latent state process is modeled by an ordinary differential equation (ODE) whose drift depends on state and treatment, while the observed data are noisy measurements of this latent state at irregular, multi resolution time points. We define the average treatment effect (ATE) as the difference of expected cumulative…
We study inference for continuous linear functionals of solutions to ill-posed inverse problems, including Euclidean parameters arising in nonparametric instrumental variables, proximal causal inference, and shadow-variable models. Although pointwise root-$n$ inference is possible under standard conditions, we show that this need not translate into locally reliable inference. Under a model imposing only minimal regularity conditions, the target is Hellinger discontinuous…
Motivation: Mediation analysis is an important tool for elucidating causal mechanisms in biomedical research and has recently gained increasing attention in microbiome studies. Motivated by a microbiome study of acute myeloid leukemia (AML) patients, we investigate whether the effect of induction chemotherapy intensity on infection status is mediated through gut microbial taxa. This problem poses substantial methodological challenges due to the high dimensionality, zero…
观测因果推断中不完全识别下的相对偏差
To conduct causal inference in observational settings, researchers must rely on certain identifying assumptions. In practice, these assumptions are unlikely to hold exactly. This paper considers the bias of selection-on-observables, instrumental variables, and proximal inference estimates under violations of their identifying assumptions. We develop bias expressions for IV and proximal inference that show how violations of their respective assumptions are amplified by any…
组间不平衡下的风险异质性稳健推断
Population-level heterogeneity is ubiquitous in biomedical data, where differences across demographic or clinical subgroups can substantially alter risk patterns. For example, in intensive care unit (ICU) studies, the mortality risk associated with specific admission diagnoses can vary across ethnic groups. Existing approaches for detecting risk heterogeneity are often sensitive to baseline model misspecification and regularization bias, both of which commonly arise in…