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Efficiently Inferring the Demographic History of Many Populations With Allele Count Data

利用等位基因计数高效推断多个种群的人口历史

The sample frequency spectrum (SFS), or histogram of allele counts, is an important summary statistic in evolutionary biology, and is often used to infer the history of population size changes, migrations, and other demographic events affecting a set of populations. The expected multipopulation SFS under a given demographic model can be efficiently computed when the populations in the model are related by a tree, scaling to hundreds of populations. Admixture, back-migration,…

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Estimating Optimal Dynamic Treatment Regimes With Survival Outcomes

生存结局下最优动态治疗策略的估计

Gabrielle Simoneaua* , Erica E. M. Moodiea , Jagtar S. Nijjarb, Robert W. Platta & the Scottish Early Rheumatoid Arthritis Inception Cohort Investigatorsa Department of Epidemiology, Biostatistics and Occupational Health, McGill University, Montreal, QC, Canada; b Department of Medicine, University of Cambridge, Cambridge, UKColor versions of one or more of the figures in the article can be found online at www.tandfonline.com/r/JASA.Supplementary materials for this article…

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Studentized Sensitivity Analysis for the Sample Average Treatment Effect in Paired Observational Studies

配对观察性研究中样本平均处理效应的学生化敏感性分析

A fundamental limitation of causal inference in observational studies is that perceived evidence for an effect might instead be explained by factors not accounted for in the primary analysis. Methods for assessing the sensitivity of a study’s conclusions to unmeasured confounding have been established under the assumption that the treatment effect is constant across all individuals. In the potential presence of unmeasured confounding, it has been argued that certain patterns…

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Distribution on Warp Maps for Alignment of Open and Closed Curves

用于开放与闭合曲线对齐的扭曲映射分布

Alignment of curve data is an integral part of their statistical analysis, and can be achieved using model- or optimization-based approaches. The parameter space is usually the set of monotone, continuous warp maps of a domain. Infinite-dimensional nature of the parameter space encourages sampling based approaches, which require a distribution on the set of warp maps. Moreover, the distribution should also enable sampling in the presence of important landmark information on…

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Optimal Sparse Linear Prediction for Block-missing Multi-modality Data Without Imputation

无需插补的块缺失多模态数据最优稀疏线性预测

In modern scientific research, data are often collected from multiple modalities. Since different modalities could provide complementary information, statistical prediction methods using multi-modality data could deliver better prediction performance than using single modality data. However, one special challenge for using multi-modality data is related to block-missing data. In practice, due to dropouts or the high cost of measures, the observations of a certain modality…

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Bayesian Model Search for Nonstationary Periodic Time Series

非平稳周期时间序列的贝叶斯模型搜索

We propose a novel Bayesian methodology for analyzing nonstationary time series that exhibit oscillatory behavior. We approximate the time series using a piecewise oscillatory model with unknown periodicities, where our goal is to estimate the change-points while simultaneously identifying the potentially changing periodicities in the data. Our proposed methodology is based on a trans-dimensional Markov chain Monte Carlo algorithm that simultaneously updates the…

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Simultaneous Covariance Inference for Multimodal Integrative Analysis

多模态整合分析中的协方差同时推断

Multimodal integrative analysis fuses different types of data collected on the same set of experimental subjects. It is becoming a norm in many branches of scientific research, such as multi-omics and multimodal neuroimaging analysis. In this article, we address the problem of simultaneous covariance inference of associations between multiple modalities, which is of a vital interest in multimodal integrative analysis. Recognizing that there are few readily available…

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GAP: A General Framework for Information Pooling in Two-Sample Sparse Inference

GAP:两样本稀疏推断的信息汇聚通用框架

Yin Xiaa, T. Tony Caib & Wenguang Sunc*a Department of Statistics, School of Management, Fudan University, Shanghai, China; b Department of Statistics, The Wharton School, University of Pennsylvania, Philadelphia, PA; c Department of Data Sciences and Operations, University of Southern California, Los Angeles, CAColor versions of one or more of the figures in the article can be found online at www.tandfonline.com/r/JASA.Supplementary materials for this article are available…

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Main Effects and Interactions in Mixed and Incomplete Data Frames

混合与不完整数据表中的主效应和交互作用

A mixed data frame (MDF) is a table collecting categorical, numerical, and count observations. The use of MDF is widespread in statistics and the applications are numerous from abundance data in ecology to recommender systems. In many cases, an MDF exhibits simultaneously main effects, such as row, column, or group effects and interactions, for which a low-rank model has often been suggested. Although the literature on low-rank approximations is very substantial, with few…

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Likelihood Ratio Tests for a Large Directed Acyclic Graph

大型有向无环图的似然比检验

Inference of directional pairwise relations between interacting units in a directed acyclic graph (DAG), such as a regulatory gene network, is common in practice, imposing challenges because of lack of inferential tools. For example, inferring a specific gene pathway of a regulatory gene network is biologically important. Yet, frequentist inference of directionality of connections remains largely unexplored for regulatory models. In this article, we propose constrained…

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Nonparametric Inference for Copulas and Measures of Dependence Under Length-Biased Sampling and Informative Censoring

长度偏倚抽样与信息性删失下 Copula 及依赖度量的非参数推断

Length-biased data are often encountered in cross-sectional surveys and prevalent-cohort studies on disease durations. Under length-biased sampling subjects with longer disease durations have greater chance to be observed. As a result, covariate values linked to the longer survivors are favored by the sampling mechanism. When the sampled durations are also subject to right censoring, the censoring is informative. Modeling dependence structure without adjusting for these…

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Testing for Jump Spillovers Without Testing for Jumps

无需预检跳跃的跳跃溢出检验

This article develops statistical tools for testing conditional independence among the jump components of the daily quadratic variation, which we estimate using intraday data. To avoid sequential bias distortion, we do not pretest for the presence of jumps. If the null is true, our test statistic based on daily integrated jumps weakly converges to a Gaussian random variable if both assets have jumps. If instead at least one asset has no jumps, then the statistic approaches…

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A Sparse Random Projection-Based Test for Overall Qualitative Treatment Effects

基于稀疏随机投影的整体定性处理效应检验

In contrast to the classical "one size fits all" approach, precision medicine proposes the customization of individualized treatment regimes to account for patients' heterogeneity in response to treatments. Most of existing works in the literature focused on estimating optimal individualized treatment regimes. However, there has been less attention devoted to hypothesis testing regarding the existence of overall qualitative treatment effects, especially when there is a large…

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Feature Selection by Canonical Correlation Search in High-Dimensional Multiresponse Models With Complex Group Structures

复杂分组高维多响应模型的典型相关搜索特征选择

High-dimensional multiresponse models with complex group structures in both the response variables and the covariates arise from current researches in important fields such as genetics and medicine. However, no enough research has been done on such models. One of a few researches, if not the only one, is the article by Li, Nan, and Zhu where the sparse group Lasso approach is extended to such models. In this article, we propose a novel approach named the sequential canonical…

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Combining Multiple Observational Data Sources to Estimate Causal Effects

合并多个观察性数据源估计因果效应

The era of big data has witnessed an increasing availability of multiple data sources for statistical analyses. We consider estimation of causal effects combining big main data with unmeasured confounders and smaller validation data with supplementary information on these confounders. Under the unconfoundedness assumption with completely observed confounders, the smaller validation data allow for constructing consistent estimators for causal effects, but the big main data…

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Comparing and Weighting Imperfect Models Using D-Probabilities

用 D 概率比较和加权不完美模型

), relying on evaluating parametric models relative to a nonparametric Bayesian reference using Kullback-Leibler divergence. D-probabilities are useful in goodness-of-fit assessments, in comparing imperfect models, and in providing model weights to be used in model aggregation. D-probabilities avoid some of the disadvantages of Bayesian model probabilities, such as large sensitivity to prior choice, and tend to place higher weight on a greater diversity of models. In an…

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Panel Data Analysis via Mechanistic Models

通过机制模型分析面板数据

Panel data, also known as longitudinal data, consist of a collection of time series. Each time series, which could itself be multivariate, comprises a sequence of measurements taken on a distinct unit. Mechanistic modeling involves writing down scientifically motivated equations describing the collection of dynamic systems giving rise to the observations on each unit. A defining characteristic of panel systems is that the dynamic interaction between units should be…

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Estimation and Selection of Spatial Weight Matrix in a Spatial Lag Model

空间滞后模型中空间权重矩阵的估计与选择

Spatial econometric models allow for interactions among variables through the specification of a spatial weight matrix. Practitioners often face the risk of misspecification of such a matrix. In many problems a number of potential specifications exist, such as geographic distances, or various economic quantities among variables. We propose estimating the best linear combination of these specifications, added with a potentially sparse adjustment matrix. The coefficients in…

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Local Parametric Estimation in High Frequency Data

高频数据中的局部参数估计

We give a general time-varying parameter model, where the multidimensional parameter possibly includes jumps. The quantity of interest is defined as the integrated value over time of the parameter process Θ=T−1∫0Tθt*dt

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The Pricing of Tail Risk and the Equity Premium: Evidence From International Option Markets

尾部风险定价与股权溢价:国际期权市场证据

We explore the pricing of tail risk as manifest in index options across international equity markets. The risk premium associated with negative tail events displays persistent shifts, unrelated to volatility. This tail risk premium is a potent predictor of future returns for all the indices, while the option-implied volatility only forecasts the future return variation. Hence, compensation for negative jump risk is the primary driver of the equity premium, whereas the reward…

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Dynamic Vector Mode Regression

动态向量众数回归

We study the semiparametric estimation of the conditional mode of a random vector that has a continuous conditional joint density with a well-defined global mode. A novel full-system estimator is proposed and its asymptotic properties are studied. We specifically consider the estimation of vector autoregressive conditional mode models and of systems of linear simultaneous equations defined by mode restrictions. The proposed estimator is easy to implement and simulations…

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A New Class of Change Point Test Statistics of Rényi Type

一类新的 Rényi 型变点检验统计量

A new class of change point test statistics is proposed that utilizes a weighting and trimming scheme for the cumulative sum (CUSUM) process inspired by Rényi. A thorough asymptotic analysis and simulations both demonstrate that this new class of statistics possess superior power compared to traditional change point statistics based on the CUSUM process when the change point is near the beginning or end of the sample. Generalizations of these “Rényi” statistics are also…

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External Validity in Fuzzy Regression Discontinuity Designs

模糊回归不连续设计的外部有效性

Fuzzy regression discontinuity designs identify the local average treatment effect (LATE) for the subpopulation of compliers, and with forcing variable equal to the threshold. We develop methods that assess the external validity of LATE to other compliance groups at the threshold, and allow for identification away from the threshold. Specifically, we focus on the equality of outcome distributions between treated compliers and always-takers, and between untreated compliers…

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The Promise and Pitfalls of Differences-in-Differences: Reflections on 16 and Pregnant and Other Applications

双重差分的潜力与陷阱:对《16岁怀孕》及其他应用的反思

We use the exchange between Kearney/Levine and Jaeger/Joyce/Kaestner on 16 and Pregnant to reexamine the use of DiD as a response to the failure of nature to properly design an experiment for us. We argue that (1) any DiD paper should address why the original levels of the experimental and control groups differed, and why this would not impact trends, (2) the parallel trends argument requires a justification of the chosen functional form and that the use of the interaction…

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