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Cross-Screening in Observational Studies That Test Many Hypotheses

多假设观察性研究中的交叉筛选

We discuss observational studies that test many causal hypotheses, either hypotheses about many outcomes or many treatments. To be credible an observational study that tests many causal hypotheses must demonstrate that its conclusions are neither artifacts of multiple testing nor of small biases from nonrandom treatment assignment. In a sense that needs to be defined carefully, hidden within a sensitivity analysis for nonrandom assignment is an enormous correction for…

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Controlling the FDR in Imperfect Matches to an Incomplete Database

不完整数据库中不完美匹配的错误发现率控制

We consider the problem of controlling the FDR among discoveries from searching an incomplete database. This problem differs from the classical multiple testing setting because there are two different types of false discoveries: those arising from objects that have no match in the database and those that are incorrectly matched. We show that commonly used FDR controlling procedures are inadequate for this setup, a special case of which is tandem mass spectrum identification.…

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Weighted False Discovery Rate Control in Large-Scale Multiple Testing

大规模多重检验中的加权错误发现率控制

The use of weights provides an effective strategy to incorporate prior domain knowledge in large-scale inference. This paper studies weighted multiple testing in a decision-theoretic framework. We develop oracle and data-driven procedures that aim to maximize the expected number of true positives subject to a constraint on the weighted false discovery rate. The asymptotic validity and optimality of the proposed methods are established. The results demonstrate that…

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False Discovery Rate Smoothing

错误发现率平滑

We present false discovery rate (FDR) smoothing, an empirical-Bayes method for exploiting spatial structure in large multiple-testing problems. FDR smoothing automatically finds spatially localized regions of significant test statistics. It then relaxes the threshold of statistical significance within these regions, and tightens it elsewhere, in a manner that controls the overall false discovery rate at a given level. This results in increased power and cleaner spatial…

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Joint testing and false discovery rate control in high-dimensional multivariate regression

高维多元回归中的联合检验与错误发现率控制

Multivariate regression with high-dimensional covariates has many applications in genomic and genetic research, in which some covariates are expected to be associated with multiple responses. This paper considers joint testing for regression coefficients over multiple responses and develops simultaneous testing methods with false discovery rate control. The test statistic is based on inverse regression and bias-corrected group lasso estimates of the regression coefficients…

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Panning for Gold: ‘Model-X’ Knockoffs for High Dimensional Controlled Variable Selection

Summary Many contemporary large-scale applications involve building interpretable models linking a large set of potential covariates to a response in a non-linear fashion, such as when the response is binary. Although this modelling problem has been extensively studied, it remains unclear how to control the fraction of false discoveries effectively even in high dimensional logistic regression, not to mention general high dimensional non-linear models. To address such a…

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Uniform confidence bands: Characterization and optimality

一致置信带的刻画与最优性

This paper studies optimal uniform confidence bands for functions g(x,β0), where β0 is an unknown parameter vector. We provide a simple characterization of a general class of taut 1−α uniform confidence bands, allowing for both nonlinear functions and nonparametrically estimated functions. Specifically, we show that all taut bands can be obtained from projections on confidence sets for β0 and we characterize the class of sets which yield taut bands. Using these results, we…

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Detecting rare and faint signals via thresholding maximum likelihood estimators

通过阈值化极大似然估计检测稀少且微弱的信号

Motivated by the analysis of RNA sequencing (RNA-seq) data for genes differentially expressed across multiple conditions, we consider detecting rare and faint signals in high-dimensional response variables. We address the signal detection problem under a general framework, which includes generalized linear models for count-valued responses as special cases. We propose a test statistic that carries out a multi-level thresholding on maximum likelihood estimators (MLEs) of the…

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Testing independence with high-dimensional correlated samples

高维相关样本的独立性检验

Testing independence among a number of (ultra) high-dimensional random samples is a fundamental and challenging problem. By arranging $n$ identically distributed $p$-dimensional random vectors into a $p\times n$ data matrix, we investigate the problem of testing independence among columns under the matrix-variate normal modeling of data. We propose a computationally simple and tuning-free test statistic, characterize its limiting null distribution, analyze the statistical…

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Multiscale blind source separation

多尺度盲源分离

We provide a new methodology for statistical recovery of single linear mixtures of piecewise constant signals (sources) with unknown mixing weights and change points in a multiscale fashion. We show exact recovery within an $\varepsilon$-neighborhood of the mixture when the sources take only values in a known finite alphabet. Based on this we provide the SLAM (Separates Linear Alphabet Mixtures) estimators for the mixing weights and sources. For Gaussian error, we obtain…

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Gaussian and bootstrap approximations for high-dimensional U-statistics and their applications

高维 U 统计量的高斯与自助法近似及其应用

This paper studies the Gaussian and bootstrap approximations for the probabilities of a nondegenerate U-statistic belonging to the hyperrectangles in $\mathbb{R}^{d}$ when the dimension $d$ is large. A two-step Gaussian approximation procedure that does not impose structural assumptions on the data distribution is proposed. Subject to mild moment conditions on the kernel, we establish the explicit rate of convergence uniformly in the class of all hyperrectangles in $\mathbb{R}^{d}$…

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Online rules for control of false discovery rate and false discovery exceedance

在线控制错误发现率与错误发现比例超限的规则

Multiple hypothesis testing is a core problem in statistical inference and arises in almost every scientific field. Given a set of null hypotheses $\mathcal{H}(n)=(H_{1},\ldots,H_{n})$, Benjamini and Hochberg [J. R. Stat. Soc. Ser. B. Stat. Methodol. 57 (1995) 289–300] introduced the false discovery rate ($\mathrm{FDR}$), which is the expected proportion of false positives among rejected null hypotheses, and proposed a testing procedure that controls $\mathrm{FDR}$ below a…

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Asymptotically honest confidence regions for high dimensional parameters by the desparsified conservative Lasso

基于去稀疏化保守 Lasso 的高维参数渐近诚实置信区域

In this paper we consider the conservative Lasso which we argue penalizes more correctly than the Lasso and show how it may be desparsified in the sense of van de Geer et al. (2014) in order to construct asymptotically honest (uniform) confidence bands. In particular, we develop an oracle inequality for the conservative Lasso only assuming the existence of a certain number of moments. This is done by means of the Marcinkiewicz–Zygmund inequality. We allow for heteroskedastic…

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Optimal sup-norm rates and uniform inference on nonlinear functionals of nonparametric IV regression

非参数工具变量回归的最优上确界范数收敛率与非线性泛函一致推断

This paper makes several important contributions to the literature about nonparametric instrumental variables (NPIV) estimation and inference on a structural function h0 and functionals of h0. First, we derive sup‐norm convergence rates for computationally simple sieve NPIV (series two‐stage least squares) estimators of h0 and its derivatives. Second, we derive a lower bound that describes the best possible (minimax) sup‐norm rates of estimating h0 and its derivatives, and…

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Oracle and adaptive false discovery rate controlling methods for one‐sided testing: theory and application in treatment effect evaluation

单侧检验中控制错误发现率的预知与自适应方法:理论及处理效应评价应用

Economists are often interested in identifying effective policies or treatments together with subpopulations of individuals who respond positively (or with a sign that is expected) to these treatment interventions. In this paper, we propose an optimal false discovery rate controlling method that is especially useful for such one‐sided testing problems. The proposed procedure is optimal in the sense of minimizing the false non‐discovery rate while controlling the false…

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Nonparametric estimation in case of endogenous selection

内生样本选择下的非参数估计

This paper addresses the problem of estimation of a nonparametric regression function from selectively observed data when selection is endogenous. Our approach relies on independence between covariates and selection conditionally on potential outcomes. Endogeneity of regressors is also allowed for. In the exogenous and endogenous case, consistent two-step estimation procedures are proposed and their rates of convergence are derived. Pointwise asymptotic distribution of the…

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IDENTIFICATION OF JOINT DISTRIBUTIONS IN DEPENDENT FACTOR MODELS

相依因子模型中联合分布的识别

This paper studies linear factor models that have arbitrarily dependent factors. Assuming that the coefficients are known and that their matrix representation satisfies rank conditions, we identify the nonparametric joint distribution of the unobserved factors using first and then second-order partial derivatives of the log characteristic function of the observed variables. In conjunction with these identification strategies the mean and variance of the vector of factors are…

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Confidence Bands for ROC Curves With Serially Dependent Data

序列相关数据下 ROC 曲线的置信带

We propose serial correlation-robust asymptotic confidence bands for the receiver operating characteristic (ROC) curve and its functional, viz., the area under ROC curve (AUC), estimated by quasi-maximum likelihood in the binormal model. Our simulation experiments confirm that this new method performs fairly well in finite samples, and confers an additional measure of robustness to nonnormality. The conventional procedure is found to be markedly undersized in terms of…

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Nonparametric Estimation and Forecasting for Time-Varying Coefficient Realized Volatility Models

时变系数已实现波动率模型的非参数估计与预测

This article introduces a new specification for the heterogenous autoregressive (HAR) model for the realized volatility of S&P 500 index returns. In this modeling framework, the coefficients of the HAR are allowed to be time-varying with unspecified functional forms. The local linear method with the cross-validation (CV) bandwidth selection is applied to estimate the time-varying coefficient HAR (TVC-HAR) model, and a bootstrap method is used to construct the point-wise…

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The Sorted Effects Method: Discovering Heterogeneous Effects Beyond Their Averages

排序效应法:揭示平均值之外的异质效应

The partial (ceteris paribus) effects of interest in nonlinear and interactive linear models are heterogeneous as they can vary dramatically with the underlying observed or unobserved covariates. Despite the apparent importance of heterogeneity, a common practice in modern empirical work is to largely ignore it by reporting average partial effects (or, at best, average effects for some groups). While average effects provide very convenient scalar summaries of typical…

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A One Covariate at a Time, Multiple Testing Approach to Variable Selection in High-Dimensional Linear Regression Models

高维线性回归变量选择的逐协变量多重检验方法

This paper provides an alternative approach to penalized regression for model selection in the context of high‐dimensional linear regressions where the number of covariates is large, often much larger than the number of available observations. We consider the statistical significance of individual covariates one at a time, while taking full account of the multiple testing nature of the inferential problem involved. We refer to the proposed method as One Covariate at a Time…

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Inference for VARs identified with sign restrictions

符号限制识别的 VAR 模型推断

There is a fast growing literature that set‐identifies structural vector autoregressions (SVARs) by imposing sign restrictions on the responses of a subset of the endogenous variables to a particular structural shock (sign‐restricted SVARs). Most methods that have been used to construct pointwise coverage bands for impulse responses of sign‐restricted SVARs are justified only from a Bayesian perspective. This paper demonstrates how to formulate the inference problem for…

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Structural similarity and difference testing on multiple sparse Gaussian graphical models

多个稀疏高斯图模型的结构相似性与差异检验

We present a new framework on inferring structural similarities and differences among multiple high-dimensional Gaussian graphical models (GGMs) corresponding to the same set of variables under distinct experimental conditions. The new framework adopts the partial correlation coefficients to characterize the potential changes of dependency strengths between two variables. A hierarchical method has been further developed to recover edges with different or similar dependency…

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Nonparametric estimation and inference under shape restrictions

形状约束下的非参数估计与推断

Economic theory often provides shape restrictions on functions of interest in applications, such as monotonicity, convexity, non-increasing (non-decreasing) returns to scale, or the Slutsky inequality of consumer theory; but economic theory does not provide finite-dimensional parametric models. This motivates nonparametric estimation under shape restrictions. Nonparametric estimates are often very noisy. Shape restrictions stabilize nonparametric estimates without imposing…

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