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Empirical Bayes estimation for additive hazards regression models

加性风险回归模型的经验贝叶斯估计

We develop a novel empirical Bayesian framework for the semiparametric additive hazards regression model. The integrated likelihood, obtained by integration over the unknown prior of the nonparametric baseline cumulative hazard, can be maximized using standard statistical software. Unlike the corresponding full Bayes method, our empirical Bayes estimators of regression parameters, survival curves and their corresponding standard errors have easily computed closed-form…

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Induced smoothing for the semiparametric accelerated failure time model: asymptotics and extensions to clustered data

半参数加速失效时间模型的诱导平滑:渐近理论与聚类数据扩展

This paper extends the induced smoothing procedure of Brown & Wang (2006) for the semiparametric accelerated failure time model to the case of clustered failure time data. The resulting procedure permits fast and accurate computation of regression parameter estimates and standard errors using simple and widely available numerical methods, such as the Newton-Raphson algorithm. The regression parameter estimates are shown to be strongly consistent and asymptotically normal; in…

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Pseudo-partial likelihood for proportional hazards models with biased-sampling data

有偏抽样数据下比例风险模型的伪偏似然

We obtain a pseudo-partial likelihood for proportional hazards models with biased-sampling data by embedding the biased-sampling data into left-truncated data. The log pseudo-partial likelihood of the biased-sampling data is the expectation of the log partial likelihood of the left-truncated data conditioned on the observed data. In addition, asymptotic properties of the estimator that maximize the pseudo-partial likelihood are derived. Applications to length-biased data,…

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Objective Bayesian model selection in Gaussian graphical models

高斯图模型中的客观贝叶斯模型选择

This paper presents a default model-selection procedure for Gaussian graphical models that involves two new developments. First, we develop a default version of the hyper-inverse Wishart prior for restricted covariance matrices, called the hyper-inverse Wishart g-prior, and show how it corresponds to the implied fractional prior for selecting a graph using fractional Bayes factors. Second, we apply a class of priors that automatically handles the problem of multiple…

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Tilting Methods for Assessing the Influence of Components in a Classifier

利用倾斜方法评估分类器中各分量的影响

Summary Many contemporary classifiers are constructed to provide good performance for very high dimensional data. However, an issue that is at least as important as good classification is determining which of the many potential variables provide key information for good decisions. Responding to this issue can help us to determine which aspects of the datagenerating mechanism (e.g. which genes in a genomic study) are of greatest importance in terms of distinguishing between…

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Semiparametric Estimation and Inference for Distributional and General Treatment Effects

分布性及一般处理效应的半参数估计与推断

Summary There is a large literature on methods of analysis for randomized trials with noncompliance which focuses on the effect of treatment on the average outcome. The paper considers evaluating the effect of treatment on the entire distribution and general functions of this effect. For distributional treatment effects, fully non-parametric and fully parametric approaches have been proposed. The fully non-parametric approach could be inefficient but the fully parametric…

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Bootstrapping Frequency Domain Tests in Multivariate Time Series with an Application to Comparing Spectral Densities

多元时间序列频域检验的自助法:谱密度比较应用

Summary We propose a general bootstrap procedure to approximate the null distribution of non-parametric frequency domain tests about the spectral density matrix of a multivariate time series. Under a set of easy-to-verify conditions, we establish asymptotic validity of the bootstrap procedure proposed. We apply a version of this procedure together with a new statistic to test the hypothesis that the spectral densities of not necessarily independent time series are equal. The…

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Efficient estimation of semiparametric conditional moment models with possibly nonsmooth residuals

残差可能不光滑的半参数条件矩模型的有效估计

This paper considers semiparametric efficient estimation of conditional moment models with possibly nonsmooth residuals in unknown parametric components ([theta]) and unknown functions (h) of endogenous variables. We show that: (1) the penalized sieve minimum distance (PSMD) estimator can simultaneously achieve root-n asymptotic normality of and nonparametric optimal convergence rate of , allowing for noncompact function parameter spaces; (2) a simple weighted bootstrap…

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Choosing instrumental variables in conditional moment restriction models

条件矩限制模型中的工具变量选择

Properties of GMM estimators are sensitive to the choice of instrument. Using many instruments leads to high asymptotic asymptotic efficiency but can cause high bias and/or variance in small samples. In this paper we develop and implement asymptotic mean square error (MSE) based criteria for instrument selection in estimation of conditional moment restriction models. The models we consider include various nonlinear simultaneous equations models with unknown…

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Semiparametric tests of conditional moment restrictions under weak or partial identification

弱识别或部分识别下条件矩限制的半参数检验

We propose two new semiparametric specification tests which test whether a vector of conditional moment conditions is satisfied for any vector of parameter values [theta]0. Unlike most existing tests, our tests are asymptotically valid under weak and/or partial identification and can accommodate discontinuities in the conditional moment functions. Our tests are moreover consistent provided that identification is not too weak. We do not require the availability of a…

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Incorrect asymptotic size of subsampling procedures based on post-consistent model selection estimators

一致模型选择后估计量的子抽样推断为何出现渐近大小错误

Subsampling and the m out of n bootstrap have been suggested in the literature as methods for carrying out inference based on post-model selection estimators and shrinkage estimators. In this paper we consider a subsampling confidence interval (CI) that is based on an estimator that can be viewed either as a post-model selection estimator that employs a consistent model selection procedure or as a super-efficient estimator. We show that the subsampling CI (of nominal level…

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Nonparametric Transition-Based Tests for Jump Diffusions

基于转移分布的跳跃扩散非参数检验

We develop a specification test for the transition density of a discretely sampled continuous-time jump-diffusion process, based on a comparison of a nonparametric estimate of the transition density or distribution function with their corresponding parametric counterparts assumed by the null hypothesis. As a special case, our method applies to pure diffusions. We provide a direct comparison of the two densities for an arbitrary specification of the null parametric model…

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Cox Models With Smooth Functional Effect of Covariates Measured With Error

含测量误差协变量平滑效应的 Cox 模型

We propose, develop, and implement a fully Bayesian inferential approach for the Cox model when the log hazard function contains unknown smooth functions of the variables measured with error. Our approach is to model nonparametrically both the log-baseline hazard and the smooth components of the log-hazard functions using low-rank penalized splines. Careful implementation of the Bayesian inferential machinery is shown to produce remarkably better results than the naive…

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Constructing Confidence Regions of Optimal Expected Size

构造具有最优期望大小的置信区域

This article presents a Monte Carlo method for approximating the minimax expected size (MES) confidence set for a parameter known to lie in a compact set. The algorithm is motivated by problems in the physical sciences in which parameters are unknown physical constants related to the distribution of observable phenomena through complex numerical models. The method repeatedly draws parameters at random from the parameter space and simulates data as if each of those values…

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Weighted Normal Spatial Scan Statistic for Heterogeneous Population Data

异质总体数据的加权正态空间扫描统计量

In geographical spatial epidemiology and disease surveillance, all the existing spatial scan methods for cluster detection using continuous data are designed for evaluating clusters of individuals and analyzing individual-level data. Motivated by growing demands to study the spatial heterogeneity of continuous measures in population data, such as mortality rates, survival rates, average body mass indexes and pollution at state, county, and census tract levels, we propose a…

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Empirical Bayes Estimates for Large-Scale Prediction Problems

大规模预测问题的经验贝叶斯估计

Classical prediction methods such as Fisher's linear discriminant function were designed for small-scale problems, where the number of predictors N is much smaller than the number of observations n. Modern scientific devices often reverse this situation. A microarray analysis, for example, might include n = 100 subjects measured on N = 10,000 genes, each of which is a potential predictor. This paper proposes an empirical Bayes approach to large-scale prediction, where the…

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An Incomplete-Data Quasi-Likelihood Approach to Haplotype-Based Genetic Association Studies on Related Individuals

相关个体单倍型遗传关联研究的不完整数据准似然方法

We propose an incomplete-data, quasi-likelihood framework, for estimation and score tests, which accommodates both dependent and partially-observed data. The motivation comes from genetic association studies, where we address the problems of estimating haplotype frequencies and testing association between a disease and haplotypes of multiple tightly-linked genetic markers, using case-control samples containing related individuals. We consider a more general setting in which…

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Jackknife Empirical Likelihood

刀切经验似然

Empirical likelihood has been found very useful in many different occasions. However, when applied directly to some more complicated statistics such as U-statistics, it runs into serious computational difficulties. In this paper, we introduce a so-called jackknife empirical likelihood (JEL) method. The new method is extremely simple to use in practice. In particular, the JEL is shown to be very effective in handling one and two-sample U-statistics. The JEL can be potentially…

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Testing for the Supremacy of a Multinomial Cell Probability

检验多项分布单元概率是否严格居首

Tests for the supremacy of a multinomial cell probability are developed. The tested null hypothesis states that a particular cell of interest is not more probable than all others. Rejection of this null leads to the conclusion that the cell of interest has a strictly greater probability than all other cells. The null hypothesis constrains the multinomial probability vector to a nonconvex region that is a union of closed convex cones. The likelihood ratio test for this…

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Confidence Regions for the Multinomial Parameter With Small Sample Size

小样本下多项分布参数的置信区域

Consider the observation of n iid realizations of an experiment with d≥2 possible outcomes, which corresponds to a single observation of a multinomial distribution ℳd(n, p) where p is an unknown discrete distribution on {1, …, d}. In many applications, the construction of a confidence region for p when n is small is crucial. This challenging concrete problem has a long history. It is well known that the confidence regions built from asymptotic statistics do not have good…

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Assessing Robustness of Intrinsic Tests of Independence in Two-Way Contingency Tables

二维列联表内禀独立性检验的稳健性评估

For testing nested hypotheses from a Bayesian standpoint, a desirable condition is that the prior for the alternative model concentrates mass around the smaller, or null, model. For testing independence in contingency tables, the intrinsic priors satisfy this requirement. Furthermore, the degree of concentration of the priors is controlled by a discrete parameter, t, the training sample size, which plays an important role in the resulting answer. In this article we report on…

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A Semiparametric Regression Cure Model for Interval-Censored Data

区间删失数据的半参数回归治愈模型

Motivated by medical studies in which patients could be cured of disease but the disease event time may be subject to interval censoring, we presents a semiparametric non-mixture cure model for the regression analysis of interval-censored time-to-event datxa. We develop semiparametric maximum likelihood estimation for the model using the expectation-maximization method for interval-censored data. The maximization step for the baseline function is nonparametric and…

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Tail Index Regression

尾指数回归

In extreme value statistics, the tail index is an important measure to gauge the heavy-tailed behavior of a distribution. Under Pareto-type distributions, we employ the logarithmic function to link the tail index to the linear predictor induced by covariates, which constitutes the tail index regression model. We then propose an approximate log-likelihood function to obtain regression parameter estimators, and subsequently show the asymptotic normality of those estimators.…

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Nonparametric Bayes Modeling of Multivariate Categorical Data

多元无序分类数据的非参数贝叶斯建模

Modeling of multivariate unordered categorical (nominal) data is a challenging problem, particularly in high dimensions and cases in which one wishes to avoid strong assumptions about the dependence structure. Commonly used approaches rely on the incorporation of latent Gaussian random variables or parametric latent class models. The goal of this article is to develop a nonparametric Bayes approach, which defines a prior with full support on the space of distributions for…

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