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Statistical properties of an early stopping rule for resampling-based multiple testing

重抽样多重检验早停规则的统计性质

Resampling-based methods for multiple hypothesis testing often lead to long run times when the number of tests is large. This paper presents a simple rule that substantially reduces computation by allowing resampling to terminate early on a subset of tests. We prove that the method has a low probability of obtaining a set of rejected hypotheses different from those rejected without early stopping, and obtain error bounds for multiple hypothesis testing. Simulation shows that…

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Two-stage testing procedures with independent filtering for genome-wide gene-environment interaction

基因组范围基因—环境交互的独立筛选两阶段检验

Several two-stage multiple testing procedures have been proposed to detect gene-environment interaction in genome-wide association studies. In this article, we elucidate general conditions that are required for validity and power of these procedures, and we propose extensions of two-stage procedures using the case-only estimator of gene-treatment interaction in randomized clinical trials. We develop a unified estimating equation approach to proving asymptotic independence…

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Scaled sparse linear regression

尺度化稀疏线性回归

Scaled sparse linear regression jointly estimates the regression coefficients and noise level in a linear model. It chooses an equilibrium with a sparse regression method by iteratively estimating the noise level via the mean residual square and scaling the penalty in proportion to the estimated noise level. The iterative algorithm costs little beyond the computation of a path or grid of the sparse regression estimator for penalty levels above a proper threshold. For the…

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An efficient empirical likelihood approach for estimating equations with missing data

缺失数据估计方程的高效经验似然方法

We explore the use of estimating equations for efficient statistical inference in case of missing data. We propose a semiparametric efficient empirical likelihood approach, and show that the empirical likelihood ratio statistic and its profile counterpart asymptotically follow central chi-square distributions when evaluated at the true parameter. The theoretical properties and practical performance of our approach are demonstrated through numerical simulations and data…

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Dispersion operators and resistant second-order functional data analysis

离散度算子与抗异常的二阶函数型数据分析

Inferences related to the second-order properties of functional data, as expressed by covariance structure, can become unreliable when the data are non-Gaussian or contain unusual observations. In the functional setting, it is often difficult to identify atypical observations, as their distinguishing characteristics can be manifold but subtle. In this paper, we introduce the notion of a dispersion operator, investigate its use in probing the second-order structure of…

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Bootstrap confidence bands for sojourn distributions in multistate semi-Markov models with right censoring

右删失多状态半马尔可夫模型中停留分布的自助法置信带

Transient semi-Markov processes have traditionally been used to describe the transitions of a patient through the various states of a multistate survival model. A survival distribution in this context is a sojourn through the states until passage to a fatal absorbing state or certain endpoint states. Using complete sojourn data, this paper shows how such survival distributions and associated hazard functions can be estimated nonparametrically and also how nonparametric…

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Asymptotic optimality and efficient computation of the leave-subject-out cross-validation

留受试者交叉验证的渐近最优性与高效计算

Although the leave-subject-out cross-validation (CV) has been widely used in practice for tuning parameter selection for various nonparametric and semiparametric models of longitudinal data, its theoretical property is unknown and solving the associated optimization problem is computationally expensive, especially when there are multiple tuning parameters. In this paper, by focusing on the penalized spline method, we show that the leave-subject-out CV is optimal in the sense…

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The transfer principle: A tool for complete case analysis

转移原理:完整案例分析的工具

This paper gives a general method for deriving limiting distributions of complete case statistics for missing data models from corresponding results for the model where all data are observed. This provides a convenient tool for obtaining the asymptotic behavior of complete case versions of established full data methods without lengthy proofs. The methodology is illustrated by analyzing three inference procedures for partially linear regression models with responses missing…

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Two-step spline estimating equations for generalized additive partially linear models with large cluster sizes

大簇样本下广义可加部分线性模型的两步样条估计方程

We propose a two-step estimating procedure for generalized additive partially linear models with clustered data using estimating equations. Our proposed method applies to the case that the number of observations per cluster is allowed to increase with the number of independent subjects. We establish oracle properties for the two-step estimator of each function component such that it performs as well as the univariate function estimator by assuming that the parametric vector…

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Convergence analysis of the Gibbs sampler for Bayesian general linear mixed models with improper priors

采用非正常先验的贝叶斯一般线性混合模型 Gibbs 采样器收敛分析

Bayesian analysis of data from the general linear mixed model is challenging because any nontrivial prior leads to an intractable posterior density. However, if a conditionally conjugate prior density is adopted, then there is a simple Gibbs sampler that can be employed to explore the posterior density. A popular default among the conditionally conjugate priors is an improper prior that takes a product form with a flat prior on the regression parameter, and so-called power…

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On the uniform asymptotic validity of subsampling and the bootstrap

子抽样与自助法的一致渐近有效性

This paper provides conditions under which subsampling and the bootstrap can be used to construct estimators of the quantiles of the distribution of a root that behave well uniformly over a large class of distributions $\mathbf{P}$. These results are then applied (i) to construct confidence regions that behave well uniformly over $\mathbf{P}$ in the sense that the coverage probability tends to at least the nominal level uniformly over $\mathbf{P}$ and (ii) to construct tests…

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Parametric estimation. Finite sample theory

参数估计的有限样本理论

The paper aims at reconsidering the famous Le Cam LAN theory. The main features of the approach which make it different from the classical one are as follows: (1) the study is nonasymptotic, that is, the sample size is fixed and does not tend to infinity; (2) the parametric assumption is possibly misspecified and the underlying data distribution can lie beyond the given parametric family. These two features enable to bridge the gap between parametric and nonparametric theory…

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Probabilistic forecasts of volatility and its risk premia

波动率及其风险溢价的概率预测

The object of this paper is to produce distributional forecasts of asset price volatility and its associated risk premia using a non-linear state space approach. Option and spot market information on the latent variance process is captured by using dual ‘model-free’ variance measures to define a bivariate observation equation in the state space model. The premium for variance diffusive risk is defined as linear in the latent variance (in the usual fashion) whilst the premium…

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Generalized smooth finite mixtures

广义平滑有限混合模型

We propose a general class of models and a unified Bayesian inference methodology for flexibly estimating the density of a response variable conditional on a possibly high-dimensional set of covariates. Our model is a finite mixture of component models with covariate-dependent mixing weights. The component densities can belong to any parametric family, with each model parameter being a deterministic function of covariates through a link function. Our MCMC methodology allows…

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A class of adaptive importance sampling weighted EM algorithms for efficient and robust posterior and predictive simulation

用于后验与预测模拟的自适应重要性加权 EM 算法

A class of adaptive sampling methods is introduced for efficient posterior and predictive simulation. The proposed methods are robust in the sense that they can handle target distributions that exhibit non-elliptical shapes such as multimodality and skewness. The basic method makes use of sequences of importance weighted Expectation Maximization steps in order to efficiently construct a mixture of Student-t densities that approximates accurately the target…

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Variable selection and functional form uncertainty in cross-country growth regressions

跨国增长回归中的变量选择与函数形式不确定性

Regression analyses of cross-country economic growth data are complicated by two main forms of model uncertainty: the uncertainty in selecting explanatory variables and the uncertainty in specifying the functional form of the regression function. Most discussions in the literature address these problems independently, yet a joint treatment is essential. We present a new framework that makes such a joint treatment possible, using flexible nonlinear models specified by…

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Mixtures of g -priors for Bayesian model averaging with economic applications

经济应用中用于贝叶斯模型平均的 g 先验混合

We examine the issue of variable selection in linear regression modelling, where we have a potentially large amount of possible covariates and economic theory offers insufficient guidance on how to select the appropriate subset. In this context, Bayesian Model Averaging presents a formal Bayesian solution to dealing with model uncertainty. Our main interest here is the effect of the prior on the results, such as posterior inclusion probabilities of regressors and predictive…

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Correct Ordering in the Zipf–Poisson Ensemble

Zipf–Poisson集合中的正确排序

Rankings based on counts are often presented to identify popular items, such as baby names, English words, or Web sites. This article shows that, in some examples, the number of correctly identified items can be very small. We introduce a standard error versus rank plot to diagnose possible misrankings. Then to explain the slowly growing number of correct ranks, we model the entire set of count data via a Zipf–Poisson ensemble with independent Xi ∼ Poi(Ni − α) for α > 1 and…

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Testing for Gene–Environment and Gene–Gene Interactions Under Monotonicity Constraints

单调性约束下的基因—环境与基因—基因交互检验

Recent genome-wide association studies (GWASs) designed to detect the main effects of genetic markers have had considerable success with many findings validated by replication studies. However, relatively few findings of gene–gene or gene–environment interactions have been successfully reproduced. Besides the main issues associated with insufficient sample size in current studies, a complication is that interactions that rank high based on p-values often correspond to…

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Nonparametric Estimation for Censored Mixture Data With Application to the Cooperative Huntington’s Observational Research Trial

删失混合数据的非参数估计及亨廷顿病观察研究应用

This work presents methods for estimating genotype-specific distributions from genetic epidemiology studies where the event times are subject to right censoring, the genotypes are not directly observed, and the data arise from a mixture of scientifically meaningful subpopulations. Examples of such studies include kin-cohort studies and quantitative trait locus (QTL) studies. Current methods for analyzing censored mixture data include two types of nonparametric maximum…

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Higher-Order Infinitesimal Robustness

高阶无穷小稳健性

Using the von Mises expansion, we study the higher-order infinitesimal robustness of a general M-functional and characterize its second-order properties. We show that second-order robustness is equivalent to the boundedness of both the estimator’s estimating function and its derivative with respect to the parameter. It implies, at the same time, (i) variance robustness and (ii) robustness of higher-order saddlepoint approximations to the estimator’s finite sample density.…

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Modeling Repeated Functional Observations

重复函数型观测的建模

We introduce a new methodological framework for repeatedly observed and thus dependent functional data, aiming at situations where curves are recorded repeatedly for each subject in a sample. Our methodology covers the case where the recordings of the curves are scheduled on a regular and dense grid and also situations more typical for longitudinal studies, where the timing of recordings is often sparse and random. The proposed models lead to an interpretable and…

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Sparse Reduced-Rank Regression for Simultaneous Dimension Reduction and Variable Selection

同时降维与变量选择的稀疏降秩回归

The reduced-rank regression is an effective method in predicting multiple response variables from the same set of predictor variables. It reduces the number of model parameters and takes advantage of interrelations between the response variables and hence improves predictive accuracy. We propose to select relevant variables for reduced-rank regression by using a sparsity-inducing penalty. We apply a group-lasso type penalty that treats each row of the matrix of the…

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SURE Estimates for a Heteroscedastic Hierarchical Model

异方差层级模型中的 SURE 估计

Hierarchical models are extensively studied and widely used in statistics and many other scientific areas. They provide an effective tool for combining information from similar resources and achieving partial pooling of inference. Since the seminal work by James and Stein (1961 James, W. and Stein, C. M. 1961. “Estimation With Quadratic Loss,”. Proceedings of the 4th Berkeley Symposium on Probability and Statistics, I: 367–379. [Google Scholar]) and Stein (1962 Stein, C. M.…

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