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Regression Models for Understanding COVID-19 Epidemic Dynamics With Incomplete Data

不完整数据下理解 COVID-19 疫情动态的回归模型

Modeling infectious disease dynamics has been critical throughout the COVID-19 pandemic. Of particular interest are the incidence, prevalence, and effective reproductive number (Rt ). Estimating these quantities is challenging due to under-ascertainment, unreliable reporting, and time lags between infection, onset, and testing. We propose a Multilevel Epidemic Regression Model to Account for Incomplete Data (MERMAID) to jointly estimate Rt , ascertainment rates, incidence,…

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Randomization Tests in Observational Studies With Staggered Adoption of Treatment

交错采用处理的观察性研究中的随机化检验

This article considers the problem of inference in observational studies with time-varying adoption of treatment. In addition to an unconfoundedness assumption that the potential outcomes are independent of the times at which units adopt treatment conditional on the units’ observed characteristics, our analysis assumes that the time at which each unit adopts treatment follows a Cox proportional hazards model. This assumption permits the time at which each unit adopts…

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Matrix Completion, Counterfactuals, and Factor Analysis of Missing Data

矩阵补全、反事实与缺失数据的因子分析

This paper proposes an imputation procedure that uses the factors estimated from a tall block along with the re-rotated loadings estimated from a wide block to impute missing values in a panel of data. Assuming that a strong factor structure holds for the full panel of data and its sub-blocks, it is shown that the common component can be consistently estimated at four different rates of convergence without requiring regularization or iteration. An asymptotic analysis of the…

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On the Properties of the Synthetic Control Estimator with Many Periods and Many Controls

大量时期与大量对照单位下合成控制估计量的性质

We consider the asymptotic properties of the synthetic control (SC) estimator when both the number of pretreatment periods and control units are large. If potential outcomes follow a linear factor model, we provide conditions under which the SC unit asymptotically recovers the factor structure of the treated unit, even when the pretreatment fit is imperfect. This happens when there are weights diluted among an increasing number of control units such that a weighted average…

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Counterfactual Analysis With Artificial Controls: Inference, High Dimensions, and Nonstationarity

人工对照的反事实分析:推断、高维与非平稳性

Recently, there has been growing interest in developing statistical tools to conduct counterfactual analysis with aggregate data when a single “treated” unit suffers an intervention, such as a policy change, and there is no obvious control group. Usually, the proposed methods are based on the construction of an artificial counterfactual from a pool of “untre ated” peers, organized in a panel data structure. In this article, we consider a general framework for counterfactual…

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On Robustness of Principal Component Regression

主成分回归的稳健性

Principal component regression (PCR) is a simple, but powerful and ubiquitously utilized method. Its effectiveness is well established when the covariates exhibit low-rank structure. However, its ability to handle settings with noisy, missing, and mixed-valued, that is, discrete and continuous, covariates is not understood and remains an important open challenge. As the main contribution of this work, we establish the robustness of PCR, without any change, in this respect…

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An Exact and Robust Conformal Inference Method for Counterfactual and Synthetic Controls

反事实与合成控制的精确稳健共形推断方法

We introduce new inference procedures for counterfactual and synthetic control methods for policy evaluation. We recast the causal inference problem as a counterfactual prediction and a structural breaks testing problem. This allows us to exploit insights from conformal prediction and structural breaks testing to develop permutation inference procedures that accommodate modern high-dimensional estimators, are valid under weak and easy-to-verify conditions, and are provably…

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Sampling Algorithms for Discrete Markov Random Fields and Related Graphical Models

离散马尔可夫随机场及相关图模型的采样算法

Discrete Markov random fields are undirected graphical models in which the nodes of a graph are discrete random variables with values usually represented by colors. Typically, graphs are taken to be square lattices, although more general graphs are also of interest. Such discrete MRFs have been studied in many disciplines. We describe the two most popular types of discrete MRFs, namely the two-state Ising model and the q-state Potts model, and variations such as the cellular…

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A Semiparametric Kernel Independence Test With Application to Mutational Signatures

半参数核独立性检验及其突变特征应用

Cancers arise owing to somatic mutations, and the characteristic combinations of somatic mutations form mutational signatures. Despite many mutational signatures being identified, mutational processes underlying a number of mutational signatures remain unknown, which hinders the identification of interventions that may reduce somatic mutation burdens and prevent the development of cancer. We demonstrate that the unknown cause of a mutational signature can be inferred by the…

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A Bayesian State-Space Approach to Mapping Directional Brain Networks

刻画有向脑网络的贝叶斯状态空间方法

The human brain is a directional network system of brain regions involving directional connectivity. Seizures are a directional network phenomenon as abnormal neuronal activities start from a seizure onset zone (SOZ) and propagate to otherwise healthy regions. To localize the SOZ of an epileptic patient, clinicians use intracranial electroencephalography (iEEG) to record the patient’s intracranial brain activity in many small regions. iEEG data are high-dimensional…

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Biased Encouragements and Heterogeneous Effects in an Instrumental Variable Study of Emergency General Surgical Outcomes

急诊普外科结局工具变量研究中的偏倚鼓励与异质性效应

We investigate the efficacy of surgical versus nonsurgical management for two gastrointestinal conditions, colitis and diverticulitis, using observational data. We deploy an instrumental variable design with surgeons’ tendencies to operate as an instrument. Assuming instrument validity, we find that nonsurgical alternatives can reduce both hospital length of stay and the risk of complications, with estimated effects larger for septic patients than for nonseptic patients. The…

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IFAA: Robust Association Identification and Inference for Absolute Abundance in Microbiome Analyses

IFAA:微生物组绝对丰度的稳健关联识别与推断

The target of inference in microbiome analyses is usually relative abundance (RA) because RA in a sample (e.g., stool) can be considered as an approximation of RA in an entire ecosystem (e.g., gut). However, inference on RA suffers from the fact that RA are calculated by dividing absolute abundances (AAs) over the common denominator (CD), the summation of all AA (i.e., library size). Because of that, perturbation in one taxon will result in a change in the CD and thus cause…

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Extrapolating Treatment Effects in Multi-Cutoff Regression Discontinuity Designs

多阈值回归不连续设计中的处理效应外推

In non-experimental settings, the Regression Discontinuity (RD) design is one of the most credible identification strategies for program evaluation and causal inference. However, RD treatment effect estimands are necessarily local, making statistical methods for the extrapolation of these effects a key area for development. We introduce a new method for extrapolation of RD effects that relies on the presence of multiple cutoffs, and is therefore design-based. Our approach…

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Efficiently Backtesting Conditional Value-at-Risk and Conditional Expected Shortfall

条件风险价值与条件预期损失的高效回测

–Given the importance of backtesting risk models and forecasts for financial institutions and regulators, we develop an efficient empirical likelihood backtest for either conditional value-at-risk or conditional expected shortfall when the given risk variable is modeled by an ARMA-GARCH process. Using a two-step procedure, the proposed backtests require less finite moments than existing backtests, allowing for robustness to heavier tails. Furthermore, we add a constraint on…

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A New Coefficient of Correlation

一种新的相关系数

–Is it possible to define a coefficient of correlation which is (a) as simple as the classical coefficients like Pearson’s correlation or Spearman’s correlation, and yet (b) consistently estimates some simple and interpretable measure of the degree of dependence between the variables, which is 0 if and only if the variables are independent and 1 if and only if one is a measurable function of the other, and (c) has a simple asymptotic theory under the hypothesis of…

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Smooth Backfitting of Proportional Hazards With Multiplicative Components

具有乘法分量的比例风险模型的光滑回代估计

Smooth backfitting has proven to have a number of theoretical and practical advantages in structured regression. By projecting the data down onto the structured space of interest smooth backfitting provides a direct link between data and estimator. This article introduces the ideas of smooth backfitting to survival analysis in a proportional hazard model, where we assume an underlying conditional hazard with multiplicative components. We develop asymptotic theory for the…

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Bayesian Projected Calibration of Computer Models

计算机模型的贝叶斯投影校准

We develop a Bayesian approach called the Bayesian projected calibration to address the problem of calibrating an imperfect computer model using observational data from an unknown complex physical system. The calibration parameter and the physical system are parameterized in an identifiable fashion via the L2-projection. The physical system is imposed a Gaussian process prior distribution, which naturally induces a prior distribution on the calibration parameter through the…

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Randomization Tests for Weak Null Hypotheses in Randomized Experiments

随机实验中弱零假设的随机化检验

The Fisher randomization test (FRT) is appropriate for any test statistic, under a sharp null hypothesis that can recover all missing potential outcomes. However, it is often sought after to test a weak null hypothesis that the treatment does not affect the units on average. To use the FRT for a weak null hypothesis, we must address two issues. First, we need to impute the missing potential outcomes although the weak null hypothesis cannot determine all of them. Second, we…

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Closed-Form Multi-Factor Copula Models With Observation-Driven Dynamic Factor Loadings

具有观测驱动动态因子载荷的闭式多因子 Copula 模型

We develop new multi-factor dynamic copula models with time-varying factor loadings and observation-driven dynamics. The new models are highly flexible, scalable to high dimensions, and ensure positivity of covariance and correlation matrices. A closed-form likelihood expression allows for straightforward parameter estimation and likelihood inference. We apply the new model to a large panel of 100 U.S. stocks over the period 2001–2014. The proposed multi-factor structure is…

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Randomization Tests for Equality in Dependence Structure

依赖结构相等性的随机化检验

We develop a new statistical procedure to test whether the dependence structure is identical between two groups. Rather than relying on a single index such as Pearson’s correlation coefficient or Kendall’s τ, we consider the entire dependence structure by investigating the dependence functions (copulas). The critical values are obtained by a modified randomization procedure designed to exploit asymptotic group invariance conditions. Implementation of the test is intuitive…

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Inference in Additively Separable Models With a High-Dimensional Set of Conditioning Variables

高维条件变量下加性可分模型的推断

This article studies nonparametric series estimation and inference for the effect of a single variable of interest x on an outcome y in the presence of potentially high-dimensional conditioning variables z. The context is an additively separable model E[y|x,z]=g0(x)+h0(z). The model is high-dimensional in the sense that the series of approximating functions for h0(z) can have more terms than the sample size, thereby allowing z potentially to have very many measured…

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Generalized Jump Regressions for Local Moments

局部矩的广义跳跃回归

We develop new high-frequency-based inference procedures for analyzing the relationship between jumps in instantaneous moments of stochastic processes. The estimation consists of two steps: the nonparametric determination of the jumps as differences in local averages, followed by a minimum-distance type estimation of the parameters of interest under general loss functions that include both least-square and more robust quantile regressions as special cases. The resulting…

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Measuring Granger Causality in Quantiles

分位数格兰杰因果性的度量

We consider measures of Granger causality in quantiles, which detect and quantify both linear and nonlinear causal effects between random variables. The measures are based on nonparametric quantile regressions and defined as logarithmic functions of restricted and unrestricted expectations of quantile check loss functions. They can consistently be estimated by replacing the unknown expectations of check loss functions by their nonparametric kernel estimates. We derive a…

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Testing the Multivariate Regular Variation Model

多元正则变差模型的检验

In this article, we propose a test for the multivariate regular variation (MRV) model. The test is based on testing whether the extreme value indices of the radial component conditional on the angular component falling in different subsets are the same. Combining the test on the constancy across extreme value indices in different directions with testing the regular variation of the radial component, we obtain the test for testing MRV. Simulation studies demonstrate the good…

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