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贝叶斯:贝叶斯建模、后验推断与 MCMC。
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Analysis of treatment response data from eligibility designs

资格随机设计中的处理反应数据分析

In this paper, we develop and compare two alternative approaches for calculating the effect of the actual intake when treatments are randomized, but compliance with the assignment in the treatment arm is less than perfect for reasons that are correlated with the outcome. The approaches are based on different identification assumptions about these unobserved confounders. In the first approach, which stems from [Sommer, A., Zeger, S., 1991. On estimating efficacy in clinical…

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Evolution of forecast disagreement in a Bayesian learning model

贝叶斯学习模型中预测分歧的演化

We estimate a Bayesian learning model with heterogeneity aimed at explaining expert forecast disagreement and its evolution over horizons. Disagreement is postulated to have three components due to differences in: (i) the initial prior beliefs, (ii) the weights attached on priors, and (iii) interpreting public information. The fixed-target, multi-horizon, cross-country feature of the panel data allows us to estimate the relative importance of each component precisely. The…

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Comparing smooth transition and Markov switching autoregressive models of US unemployment

美国失业率的平滑转换与马尔可夫转换自回归模型比较

Abstract Logistic smooth transition and Markov switching autoregressive models of a logistic transform of the monthly US unemployment rate are estimated by Markov chain Monte Carlo methods. The Markov switching model is identified by constraining the first autoregression coefficient to differ across regimes. The transition variable in the LSTAR model is the lagged seasonal difference of the unemployment rate. Out‐of‐sample forecasts are obtained from Bayesian predictive…

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A semi-parametric Bayesian approach to the instrumental variable problem

工具变量问题的半参数贝叶斯方法

We develop a Bayesian semi-parametric approach to the instrumental variable problem. We assume linear structural and reduced form equations, but model the error distributions non-parametrically. A Dirichlet process prior is used for the joint distribution of structural and instrumental variable equations errors. Our implementation of the Dirichlet process prior uses a normal distribution as a base model. It can therefore be interpreted as modeling the unknown joint…

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Practical Filtering with Sequential Parameter Learning

带序贯参数学习的实用滤波方法

Summary The paper develops a simulation-based approach to sequential parameter learning and filtering in general state space models. Our approach is based on approximating the target posterior by a mixture of fixed lag smoothing distributions. Parameter inference exploits a sufficient statistic structure and the methodology can be easily implemented by modifying state space smoothing algorithms. We avoid reweighting particles and hence sample degeneracy problems that plague…

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Bounds for Bayesian order identification with application to mixtures

贝叶斯阶数识别的误差界及其混合模型应用

The efficiency of two Bayesian order estimators is studied. By using nonparametric techniques, we prove new underestimation and overestimation bounds. The results apply to various models, including mixture models. In this case, the errors are shown to be O(e−an) and $O((\log n)^{b}/\sqrt{n})$ (a, b>0), respectively.

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Bayesian identification, selection and estimation of semiparametric functions in high-dimensional additive models

高维加性模型中半参数函数的贝叶斯识别、选择与估计

In this paper we propose an approach to both estimate and select unknown smooth functions in an additive model with potentially many functions. Each function is written as a linear combination of basis terms, with coefficients regularized by a proper linearly constrained Gaussian prior. Given any potentially rank deficient prior precision matrix, we show how to derive linear constraints so that the corresponding effect is identified in the additive model. This allows for the…

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Bayesian analysis of the ordered probit model with endogenous selection

具有内生选择的有序 Probit 模型的贝叶斯分析

This paper presents a Bayesian analysis of an ordered probit model with endogenous selection. The model can be applied when analyzing ordered outcomes that depend on endogenous covariates that are discrete choice indicators modeled by a multinomial probit model. The model is illustrated by analyzing the effects of different types of medical insurance plans on the level of hospital utilization, allowing for potential endogeneity of insurance status. The estimation is…

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Cromwell's Rule and the Role of the Prior in the Economic Metric

克伦威尔法则与经济意义度量中的先验作用

We show that using Bayesian decision theory to draw inference about the economic significance of a model requires careful specification of model uncertainty in the prior density. As an example, we use the Bayesian investor's portfolio allocation problem to show that failure to include probability point mass on the null hypothesis that returns are not predictable will overstate the economic significance of the predictive model. The dissonance between the statistical and…

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The Markov-Switching Multifractal Model of Asset Returns

资产收益的马尔可夫切换多重分形模型

Multifractal processes have recently been proposed as a new formalism for modeling the time series of returns in finance. The major attraction of these processes is their ability to generate various degrees of long memory in different powers of returns—a feature that has been found in virtually all financial data. Initial difficulties stemming from nonstationarity and the combinatorial nature of the original model have been overcome by the introduction of an iterative…

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PREDICTIVE DENSITY ESTIMATION FOR MULTIPLE REGRESSION

多元回归的预测密度估计

Suppose we observe X ∼ Nm(Aβ,σ2I) and would like to estimate the predictive density p(y|β) of a future Y ∼ Nn(Bβ,σ2I). Evaluating predictive estimates by Kullback–Leibler loss, we develop and evaluate Bayes procedures for this problem. We obtain general sufficient conditions for minimaxity and dominance of the “noninformative” uniform prior Bayes procedure. We extend these results to situations where only a subset of the predictors in A is thought to be potentially…

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AN IN-DEPTH LOOK AT HIGHEST POSTERIOR MODEL SELECTION

最高后验概率模型选择的深入考察

We consider the properties of the highest posterior probability model in a linear regression setting. Under a spike and slab hierarchy we find that although highest posterior model selection is total risk consistent, it possesses hidden undesirable properties. One such property is a marked underfitting in finite samples, a phenomenon well noted for Bayesian information criterion (BIC) related procedures but not often associated with highest posterior model selection. Another…

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The Matrix Stick-Breaking Process

矩阵折棒过程

In analyzing data from multiple related studies, it often is of interest to borrow information across studies and to cluster similar studies. Although parametric hierarchical models are commonly used, of concern is sensitivity to the form chosen for the random-effects distribution. A Dirichlet process (DP) prior can allow the distribution to be unknown, while clustering studies; however, the DP does not allow local clustering of studies with respect to a subset of the…

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Sequential Experimental Designs for Generalized Linear Models

广义线性模型的序贯实验设计

We consider the problem of experimental design when the response is modeled by a generalized linear model (GLM) and the experimental plan can be determined sequentially. Most previous research on this problem has been limited either to one-factor, binary response experiments or to augmenting the design when there are already sufficient data to compute parameter estimates. We suggest a new procedure for the sequential choice of observations that offers five important…

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Mixtures of g Priors for Bayesian Variable Selection

用于贝叶斯变量选择的 g 先验混合

Zellner's g prior remains a popular conventional prior for use in Bayesian variable selection, despite several undesirable consistency issues. In this article we study mixtures of g priors as an alternative to default g priors that resolve many of the problems with the original formulation while maintaining the computational tractability that has made the g prior so popular. We present theoretical properties of the mixture g priors and provide real and simulated examples to…

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Bayesian Hierarchical Curve Registration

贝叶斯层级曲线配准

Functional data often exhibit a common shape, but with variations in amplitude and phase across curves. The analysis often proceeds by synchronization of the data through curve registration. In this article we propose a Bayesian hierarchical model for curve registration. Our hierarchical model provides a formal account of amplitude and phase variability while borrowing strength from the data across curves in the estimation of the model parameters. We discuss extensions of…

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Spatial-Temporal Modeling of Forest Gaps Generated by Colonization From Below- and Above-Ground Bark Beetle Species

地下与地上树皮甲虫定殖引致林隙的时空建模

Studies of forest declines are important, because they both reduce timber production and affect successional trajectories of landscapes and ecosystems. Of particular interest is the decline of red pines, which is characterized by expanding areas of dead and chlorotic trees in plantations throughout the Great Lakes region. Here we examine the impact of two bark beetle groups, red turpentine beetles and pine engraver bark beetles, on tree mortality and the subsequent gap…

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Relating Ambient Particulate Matter Concentration Levels to Mortality Using an Exposure Simulator

利用暴露模拟器研究环境颗粒物浓度与死亡率的关系

Since the U.S. Environmental Protection Agency began widespread monitoring of PM2.5 (particulate matter <2.5 μ in diameter) concentration levels in the late 1990s, the epidemiological community has performed several observational studies directly relating PM2.5 concentration to various health endpoints including mortality and morbidity. However, recent research suggests that human exposure to the constituents of PM2.5 may differ significantly from ambient (or outdoor) PM2.5…

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Bayesian Clustering of Transcription Factor Binding Motifs

转录因子结合基序的贝叶斯聚类

Genes are often regulated in living cells by proteins called transcription factors that bind directly to short segments of DNA in close proximity to specific genes. These binding sites have a conserved nucleotide appearance, which is called a motif. Several recent studies of transcriptional regulation require the reduction of a large collection of motifs into clusters based on the similarity of their nucleotide composition. We present a principled approach to this clustering…

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Modeling Disease Progression With Longitudinal Markers

利用纵向标志物建模疾病进展

In this paper we propose a Bayesian natural history model for disease progression based on the joint modeling of longitudinal biomarker levels, age at clinical detection of disease and disease status at diagnosis. We establish a link between the longitudinal responses and the natural history of the disease by using an underlying latent disease process which describes the onset of the disease and models the transition to an advanced stage of the disease as dependent on the…

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Using the variance structure of the conditional autoregressive spatial specification to model knowledge spillovers

利用条件自回归空间模型的方差结构刻画知识溢出

Abstract This study investigates the pattern of knowledge spillovers arising from patent activity between European regions. A Bayesian hierarchical model is developed that specifies region‐specific latent effects parameters modeled using a connectivity structure between regions that can reflect geographical proximity in conjunction with technological and other types of proximity. This approach exploits the fact that interregional relationships may exhibit industry‐specific…

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Bayesian counterfactual analysis of the sources of the great moderation

大缓和来源的贝叶斯反事实分析

Abstract We use counterfactual experiments to investigate the sources of the large volatility reduction in US real GDP growth in the 1980s. Contrary to an existing literature that conducts counterfactual experiments based on classical estimation and point estimates, we consider Bayesian analysis that provides a straightforward measure of estimation uncertainty for the counterfactual quantity of interest. Using Blanchard and Quah's ( 1989 ) structural VAR model of output…

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A family of Bayes multiple testing procedures

一族贝叶斯多重检验程序

Under the model of independent test statistics, we propose a two-parameter family of Bayes multiple testing procedures. The two parameters can be viewed as tuning parameters. Using the Benjamini–Hochberg step-up procedure for controlling false discovery rate as a baseline for conservativeness, we choose the tuning parameters to compromise between the operating characteristics of that procedure and a less conservative procedure that focuses on alternatives that a priori might…

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Kernel stick-breaking processes

核折棒过程

We propose a class of kernel stick-breaking processes for uncountable collections of dependent random probability measures. The process is constructed by first introducing an infinite sequence of random locations. Independent random probability measures and beta-distributed random weights are assigned to each location. Predictor-dependent random probability measures are then constructed by mixing over the locations, with stick-breaking probabilities expressed as a kernel…

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