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贝叶斯:贝叶斯建模、后验推断与 MCMC。
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Adaptive Partition Factor Analysis

自适应划分因子分析

Factor Analysis has traditionally been utilized across diverse disciplines to extrapolate latent traits that influence the behavior of multivariate observed variables. Historically, the focus has been on analyzing data from a single study, neglecting the potential study-specific variations present in data from multiple studies. Multi-study factor analysis has emerged as a recent methodological advancement that addresses this gap by distinguishing between latent traits shared…

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Translating Predictive Distributions into Informative Priors

将预测分布转化为信息性先验

“When complex Bayesian models exhibit implausible behaviour, one solution is to assemble available information into an informative prior. Challenges arise as prior information is often only available for the observable quantity, or some model-derived marginal quantity, rather than directly pertaining to the (usually latent) parameters in our model. We propose a method for translating available prior information, in the form of an elicited distribution for the observable or…

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Bayesian analysis of product feature allocation models

乘积形式特征分配模型的贝叶斯分析

Abstract Feature allocation models are an extension of Bayesian nonparametric clustering models, where individuals can share multiple features. We study a broad class of models whose probability distribution has a product form, which includes the popular Indian buffet process. This class plays a prominent role among existing priors, and it shares structural characteristics with Gibbs-type priors in the species sampling framework. We develop a general theory for the entire…

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Scalable Bayesian inference for heat kernel Gaussian processes on manifolds

流形上热核高斯过程的可扩展贝叶斯推断

Abstract We establish a scalable manifold learning method and theory, motivated by the problem of estimating functional magnetic resonance imaging activation manifolds in the Human Connectome Project. Our primary contribution is the development of an efficient estimation technique for heat kernel Gaussian processes in the exponential family model. This approach handles large sample sizes n, preserves the intrinsic geometry of data, and significantly reduces computational…

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An AI-powered Bayesian Generative Modeling Approach for Causal Inference in Observational Studies

观察性研究中用于因果推断的人工智能贝叶斯生成模型

Causal inference in observational studies with high-dimensional covariates presents significant challenges. We introduce CausalBGM, an AI-powered Bayesian generative modeling approach that captures the causal relationship among covariates, treatment, and outcome. The core innovation is to estimate the individual treatment effect (ITE) by learning the individual-specific distribution of a low-dimensional latent feature set (e.g., latent confounders) that drives changes in…

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Bayesian Phase 1–2 Designs with Adaptive Rules for Staggering Patient Entry

具有自适应患者错峰入组规则的贝叶斯Ⅰ—Ⅱ期试验设计

For first-in-human dose-finding trials, to protect patient safety, regulatory agencies may enforce strict within-cohort staggering rules that require delaying treatment of each patient in the first cohort at an untried dose until dose-limiting toxicities (DLTs) of all previously treated patients have been evaluated. Consequently, many new patients may face therapy delays, which reduces their probability of achieving a response due to disease progression, or be treated…

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Optimal Plug-in Gaussian Processes for Modeling Derivatives

用于导数建模的最优代入式高斯过程

Derivatives are a key nonparametric functional in wide-ranging applications where the rate of change of an unknown function is of interest. In the Bayesian paradigm, Gaussian processes (GPs) are routinely used as a flexible prior for unknown functions, and are arguably one of the most popular tools in many areas. However, little is known about the optimal modeling strategy and theoretical properties when using GPs for derivatives. In this article, we study a plug-in strategy…

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Bayesian Nonparametric Spectral Analysis of Locally Stationary Processes

局部平稳过程的贝叶斯非参数谱分析

Stationarity plays a pivotal role in time series analysis. It is not only the basis for the derivation of general asymptotic theory but it also allows an efficient analysis in the frequency domain via the Whittle likelihood, based on the asymptotic independence of the Fourier coefficients. However, many regularly sampled data derived from the observation of physical or ecological processes, for instance, are only locally stationary. They exhibit slowly evolving spectra and…

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Covariate-Elaborated Robust Partial Information Transfer with Conditional Spike-and-Slab Prior

基于条件尖峰—厚尾先验的协变量细化稳健部分信息迁移

The popularity of transfer learning stems from the fact that it can borrow information from useful auxiliary datasets. Existing statistical transfer learning methods usually adopt a global similarity measure between the source data and the target data, which may lead to inefficiency when only partial information is shared. In this paper, we propose a novel Bayesian transfer learning method named “CONCERT” to allow robust partial information transfer for high-dimensional data…

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Posterior Risk of Modular and Semi-Modular Bayesian Inference

模块化与半模块化贝叶斯推断的后验风险

Modular Bayesian methods perform inference in models that are specified through a collection of coupled sub-models, known as modules. These modules often arise from modeling different data sources or from combining domain knowledge from different disciplines. “Cutting feedback” is a Bayesian inference method that ensures misspecification of one module does not affect inferences for parameters in other modules, and produces what is known as the cut posterior. However,…

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Bayesian Geostatistics Using Predictive Stacking

利用预测堆叠的贝叶斯地统计分析

We develop Bayesian predictive stacking for geostatistical models, where the primary inferential objective is to provide inference on the latent spatial random field and conduct spatial predictions at arbitrary locations. We exploit analytically tractable posterior distributions for regression coefficients of predictors and the realizations of the spatial process conditional upon process parameters. We subsequently combine such inference by stacking these models across the…

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Spatiotemporal Besov Priors for Bayesian Inverse Problems

贝叶斯逆问题的时空 Besov 先验

Fast development in science and technology has driven the need for proper statistical tools to capture special data features such as abrupt changes or sharp contrast. Many inverse problems in data science require spatiotemporal solutions derived from a sequence of time-dependent objects with these spatial features, for example, the dynamic reconstruction of computerized tomography (CT) images with edges. Conventional methods based on Gaussian processes (GP) often fall short…

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The Factor Structure of Disagreement

预期分歧的因子结构

We estimate a Bayesian three-dimensional dynamic factor model on the individual forecasts in the Survey of Professional Forecasters. The factors extract the most important dimensions along which disagreement comoves across variables. We interpret our results through a generic dispersed information model. The two most important factors in the data describe disagreement about aggregate supply and demand, respectively. Up until the Great Moderation, supply disagreement was…

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Fast and Flexible Emulation of Spatial Extremes Processes via Variational Autoencoders

通过变分自编码器快速灵活地模拟空间极值过程

Many real-world processes have complex tail dependence structures that cannot be adequately characterized using classical Gaussian processes. Alternatively, models motivated by extreme-value theory exhibit appealing extremal dependence properties but are often exceedingly prohibitive to fit and simulate from in high dimensions using classical methods. In this paper, we extend the boundaries on computation and modeling of high-dimensional spatial extremes by integrating a new…

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Adaptive Bayesian regression on data with low intrinsic dimensionality

低内在维度数据上的自适应贝叶斯回归

We study how the posterior contraction rate under a Gaussian process (GP) prior depends on the intrinsic dimension of the predictors and the smoothness of the regression function. An open question is whether a generic GP prior that does not incorporate knowledge of the intrinsic lower-dimensional structure of the predictors can attain an adaptive rate for a broad class of such structures. We show that this is indeed the case, establishing conditions under which the posterior…

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Bayesian Image Mediation Analysis

贝叶斯图像中介分析

Mediation analysis aims to separate the indirect effect through mediators from the direct effect of the exposure on the outcome. It is challenging to perform mediation analysis with neuroimaging data which involves high dimensionality, complex spatial correlations, sparse activation patterns and relatively low signal-to-noise ratio. To address these issues, we develop a new spatially varying coefficient structural equation model for Bayesian Image Mediation Analysis (BIMA).…

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Scalable Estimation of Multinomial Response Models with Random Consideration Sets

随机考虑集多项响应模型的可扩展估计

A common assumption in the fitting of unordered multinomial response models for $J$ mutually exclusive categories is that the responses arise from the same set of $J$ categories across subjects. However, when responses measure a choice made by the subject, it is more appropriate to condition the distribution of multinomial responses on a subject-specific consideration set, drawn from the power set of $\{1,2,\ldots,J\}$. This leads to a mixture of multinomial response models…

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Bayesian Nonparametric Quasi Likelihood

贝叶斯非参数准似然

A recent trend in Bayesian research has been revisiting generalizations of the likelihood that enable Bayesian inference without requiring the specification of a data generating mechanism. This article focuses on a Bayesian nonparametric extension of Wedderburn’s quasi-likelihood, using Bayesian additive regression trees to model the mean function. Here, the analyst posits only a structural relationship between the mean and variance of the outcome. We show that this approach…

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Sequential Gibbs posteriors with applications to principal component analysis

序贯 Gibbs 后验及其主成分分析应用

Summary Gibbs posteriors are proportional to a prior distribution multiplied by an exponentiated loss function, with a key tuning parameter that weights the information in the loss relative to the prior and provides control of posterior uncertainty. Gibbs posteriors provide a principled framework for likelihood-free Bayesian inference; however, in many situations, the inclusion of a single tuning parameter inevitably leads to poor uncertainty quantification. In particular,…

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Asymptotics for a class of parametric martingale posteriors

一类参数化鞅后验的渐近理论

Summary The martingale posterior framework replaces the elicitation of the likelihood and prior with that of a sequence of one-step-ahead predictive densities for Bayesian inference. Posterior sampling then involves the imputation of unobserved quantities and can then be carried out in an expedient and parallelizable manner using predictive resampling, without requiring Markov chain Monte Carlo. Recent work has investigated the use of plug-in parametric predictive densities,…

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Geodesic slice sampling on Riemannian manifolds

黎曼流形上的测地线切片采样

Summary We propose a theoretically justified and practically applicable slice-sampling-based Markov chain Monte Carlo method for approximate sampling from probability measures on Riemannian manifolds. The latter naturally arise as posterior distributions in Bayesian inference of matrix-valued parameters, for example belonging to either the Stiefel or the Grassmann manifold. Our method, called geodesic slice sampling, generalizes hit-and-run slice sampling on $ \mathbb{R}^{d} $…

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Treatment choice with nonlinear regret

非线性遗憾下的处理选择

Summary Following Savage (1951)and Manski (2004), the literature on statistical treatment choice focuses on the mean of welfare regret. Ignoring other features of the regret distribution, however, can lead to a rule that is sensitive to sampling uncertainty. We propose to minimize the mean of a nonlinear transformation of regret and show that singleton rules are not essentially complete for nonlinear regret. Focusing on mean-square regret, we derive closed-form fractions for…

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Empirical likelihood for manifolds

流形数据的经验似然

Abstract There has been growing interest in statistical analysis of random objects taking values in a non-Euclidean metric space. One important class of such objects consists of data on manifolds. This article is concerned with inference on the Fréchet mean and related population objects on manifolds. We develop the concept of nonparametric likelihood for data on manifolds and propose general inference methods by adapting the theory of empirical likelihood. In addition to…

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Semiparametric Bernstein–von Mises phenomenon via Isotonized Posterior in Wicksell’s problem

Wicksell 问题中经保序化后验的半参数 Bernstein–von Mises 现象

In this paper, we propose a novel Bayesian approach for nonparametric estimation in Wicksell’s problem. This has important applications in astronomy for estimating the distribution of the positions of the stars in a galaxy given projected stellar positions and in materials science to determine the 3D microstructure of a material, using its 2D cross-sections. We deviate from the classical Bayesian nonparametric approach, which would place a Dirichlet Process (DP) prior on the…

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