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Linear or Nonlinear? Automatic Structure Discovery for Partially Linear Models

线性还是非线性?部分线性模型的自动结构发现

Partially linear models provide a useful class of tools for modeling complex data by naturally incorporating a combination of linear and nonlinear effects within one framework. One key question in partially linear models is the choice of model structure, that is, how to decide which covariates are linear and which are nonlinear. This is a fundamental, yet largely unsolved problem for partially linear models. In practice, one often assumes that the model structure is given or…

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Rao–Blackwellization for Bayesian Variable Selection and Model Averaging in Linear and Binary Regression: A Novel Data Augmentation Approach

线性与二元回归中贝叶斯变量选择和模型平均的 Rao–Blackwell 化

Choosing the subset of covariates to use in regression or generalized linear models is a ubiquitous problem. The Bayesian paradigm addresses the problem of model uncertainty by considering models corresponding to all possible subsets of the covariates, where the posterior distribution over models is used to select models or combine them via Bayesian model averaging (BMA). Although conceptually straightforward, BMA is often difficult to implement in practice, since either the…

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Predicting False Discovery Proportion Under Dependence

依赖条件下错误发现比例的预测

We present a flexible framework for predicting error measures in multiple testing situations under dependence. Our approach is based on modeling the distribution of the probit transform of the p-values by mixtures of multivariate skew-normal distributions. The model can incorporate dependence among p-values and it allows for shape restrictions on the p-value density. A nonparametric Bayesian scheme for estimating the components of the mixture model is outlined and Markov…

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Correcting for Population Stratification in Genomewide Association Studies

全基因组关联研究中的群体分层校正

Genomewide association studies have become the primary tool for discovering the genetic basis of complex human diseases. Such studies are susceptible to the confounding effects of population stratification, in that the combination of allele-frequency heterogeneity with disease-risk heterogeneity among different ancestral subpopulations can induce spurious associations between genetic variants and disease. This article provides a statistically rigorous and computationally…

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Optimal Weight Choice for Frequentist Model Average Estimators

频率学派模型平均估计量的最优权重选择

There has been increasing interest recently in model averaging within the frequentist paradigm. The main benefit of model averaging over model selection is that it incorporates rather than ignores the uncertainty inherent in the model selection process. One of the most important, yet challenging, aspects of model averaging is how to optimally combine estimates from different models. In this work, we suggest a procedure of weight choice for frequentist model average…

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Distinct Counting With a Self-Learning Bitmap

利用自学习位图估计不同元素数量

Counting the number of distinct elements (cardinality) in a dataset is a fundamental problem in database management. In recent years, there has been significant interest to address the distinct counting problem in a data stream setting, where each incoming data can be seen only once and cannot be stored for long periods of time. Many probabilistic approaches based on either sampling or sketching have been proposed in the computer science literature that only require limited…

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Summarizing Insurance Scores Using a Gini Index

用基尼指数概括保险评分

Individuals, corporations and government entities regularly exchange financial risks y at prices Π. Comparing distributions of risks and prices can be difficult, particularly when the financial risk distribution is complex. For example, with insurance, it is not uncommon for a risk distribution to be a mixture of 0’s (corresponding to no claims) and a right-skewed distribution with thick tails (the claims distribution). However, analysts do not work in a vacuum, and in the…

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Large Volatility Matrix Inference via Combining Low-Frequency and High-Frequency Approaches

结合低频与高频方法的大维波动矩阵推断

It is increasingly important in financial economics to estimate volatilities of asset returns. However, most of the available methods are not directly applicable when the number of assets involved is large, due to the lack of accuracy in estimating high-dimensional matrices. Therefore it is pertinent to reduce the effective size of volatility matrices in order to produce adequate estimates and forecasts. Furthermore, since high-frequency financial data for different assets…

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Nonparametric Bayes Stochastically Ordered Latent Class Models

具有随机序约束的非参数贝叶斯潜在类别模型

Latent class models (LCMs) are used increasingly for addressing a broad variety of problems, including sparse modeling of multivariate and longitudinal data, model-based clustering, and flexible inferences on predictor effects. Typical frequentist LCMs require estimation of a single finite number of classes, which does not increase with the sample size, and have a well-known sensitivity to parametric assumptions on the distributions within a class. Bayesian nonparametric…

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Hierarchical Clustering With Prototypes via Minimax Linkage

通过极小极大连接实现带原型的层次聚类

Agglomerative hierarchical clustering is a popular class of methods for understanding the structure of a dataset. The nature of the clustering depends on the choice of linkage—that is, on how one measures the distance between clusters. In this article we investigate minimax linkage, a recently introduced but little-studied linkage. Minimax linkage is unique in naturally associating a prototype chosen from the original dataset with every interior node of the dendrogram. These…

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Analysis of Long Period Variable Stars With Nonparametric Tests for Trend Detection

用非参数趋势检验分析长周期变星

In astronomy the study of variable stars—that is, stars characterized by showing significant variation in their brightness over time—has made crucial contributions to our understanding of many phenomena, from stellar birth and evolution to the calibration of the extragalactic distance scale. In this article, we develop a method for analyzing multiple, (pseudo)-periodic time series with the goal of detecting temporal trends in their periods. We allow for nonstationary noise…

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Variational Bayesian Inference for Parametric and Nonparametric Regression With Missing Data

预测变量缺失下参数与非参数回归的变分贝叶斯推断

Bayesian hierarchical models are attractive structures for conducting regression analyses when the data are subject to missingness. However, the requisite probability calculus is challenging and Monte Carlo methods typically are employed. We develop an alternative approach based on deterministic variational Bayes approximations. Both parametric and nonparametric regression are considered. Attention is restricted to the more challenging case of missing predictor data. We…

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Posterior Probability of Discovery and Expected Rate of Discovery for Multiple Hypothesis Testing and High Throughput Assays

多重检验与高通量检测中的发现后验概率和预期发现率

Technologies of measuring millions of quantities at once have been rapidly developed and used in biological and biomedical research and other fields in the past decade. Yet a key issue remains unsettled, namely, how to control spurious findings for the ensuing massive number of hypothesis tests. An emerging consensus is to control false discovery rate (FDR), with FDR defined as the expected proportion of true nulls among discoveries, and a discovery the rejection of a null…

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Bayesian Inference for the Spatial Random Effects Model

空间随机效应模型的贝叶斯推断

Spatial statistical analysis of massive amounts of spatial data can be challenging because computation of optimal procedures can break down. The Spatial Random Effects (SRE) model uses a fixed number of known but not necessarily orthogonal (multiresolutional) spatial basis functions, which gives a flexible family of nonstationary covariance functions, results in dimension reduction, and yields optimal spatial predictors whose computations are scalable. By modeling spatial…

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An Asymptotically Pivotal Transform of the Residuals Sample Autocorrelations With Application to Model Checking

用于模型检验的残差样本自相关渐近枢轴变换

We propose an asymptotically distribution-free transform of the sample autocorrelations of residuals in general parametric time series models, possibly nonlinear in variables. The residuals autocorrelation function is the basic model checking tool in time series analysis, but it is not useful when its distribution is incorrectly approximated because the effects of parameter estimation and/or higher-order serial dependence have not been taken into account. The limiting…

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Adaptive Confidence Intervals for the Test Error in Classification

分类测试误差的自适应置信区间

The estimated test error of a learned classifier is the most commonly reported measure of classifier performance. However, constructing a high quality point estimator of the test error has proved to be very difficult. Furthermore, common interval estimators (e.g. confidence intervals) are based on the point estimator of the test error and thus inherit all the difficulties associated with the point estimation problem. As a result, these confidence intervals do not reliably…

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Identifying Risk Factors for Severe Childhood Malnutrition by Boosting Additive Quantile Regression

用提升法加性分位数回归识别儿童严重营养不良风险因素

We investigated the risk factors for childhood malnutrition in India based on the 2005/2006 Demographic and Health Survey by applying a novel estimation technique for additive quantile regression. Ordinary linear and generalized linear regression models relate the mean of a response variable to a linear combination of covariate effects, and, as a consequence, focus on average properties of the response. The use of such a regression model for analyzing childhood malnutrition…

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Making and Evaluating Point Forecasts

点预测的形成与评价

Typically, point forecasting methods are compared and assessed by means of an error measure or scoring function, with the absolute error and the squared error being key examples. The individual scores are averaged over forecast cases, to result in a summary measure of the predictive performance, such as the mean absolute error or the mean squared error. I demonstrate that this common practice can lead to grossly misguided inferences, unless the scoring function and the…

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Predictive Macro-Finance With Dynamic Partition Models

利用动态分割模型进行宏观金融预测

Dynamic partition models are used to predict movements in the term structure of interest rates. This allows one to understand historic cycles in the performance of how interest rates behave, and to offer policy makers guidance regarding future expectations on their evolution. Our approach allows for a random number of possible change points in the term structure of interest rates. We use particle learning to learn about the unobserved state variables in a new class of…

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Best Predictive Small Area Estimation

最佳预测小域估计

We derive the best predictive estimator (BPE) of the fixed parameters under two well-known small area models, the Fay–Herriot model and the nested-error regression model. This leads to a new prediction procedure, called observed best prediction (OBP), which is different from the empirical best linear unbiased prediction (EBLUP). We show that BPE is more reasonable than the traditional estimators derived from estimation considerations, such as maximum likelihood (ML) and…

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Modeling Partial Compliance Through Copulas in a Principal Stratification Framework

主分层框架下用Copula建模部分依从性

Within the principal stratification framework for causal inference, modeling partial compliance is challenging because the continuous nature of the principal strata raises subtle specification issues. In this context, we propose an approach based on the assumption that the joint distribution of the degree of compliance to the treatment and the degree of compliance to the control follows a Plackett copula, so that their association is modeled in a flexible way through a…

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An Outlier-Robust Fit for Generalized Additive Models With Applications to Disease Outbreak Detection

用于疾病暴发检测的广义可加模型异常值稳健拟合

We are interested in a class of unsupervised methods to detect possible disease outbreaks, that is, rapid increases in the number of cases of a particular disease that deviate from the pattern observed in the past. The motivating application for this article deals with detecting outbreaks using generalized additive models (GAMs) to model weekly counts of certain infectious diseases. We can use the distance between the predicted and observed counts for a specific week to…

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Cocaine Dependence Treatment Data: Methods for Measurement Error Problems With Predictors Derived From Stationary Stochastic Processes

平稳随机过程衍生预测变量的测量误差校正:可卡因治疗数据应用

In a cocaine dependence treatment study, we use linear and nonlinear regression models to model posttreatment cocaine craving scores and first cocaine relapse time. A subset of the covariates are summary statistics derived from baseline daily cocaine use trajectories, such as baseline cocaine use frequency and average daily use amount. These summary statistics are subject to estimation error and can therefore cause biased estimators for the regression coefficients. Unlike…

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A Semiparametric Threshold Model for Censored Longitudinal Data Analysis

删失纵向数据分析的半参数阈值模型

Motivated by an investigation of the relationship between blood pressure change and progression of microalbuminuria (MA) among individuals with type I diabetes, we propose a new semiparametric threshold model for censored longitudinal data analysis. We also study a new semiparametric Bayes information criterion-type criterion for identifying the parametric component of the proposed model. Cluster effects in the model are implemented as unknown fixed effects. Asymptotic…

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