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Multitask Quantile Regression Under the Transnormal Model

transnormal 模型下的多任务分位数回归

We consider estimating multitask quantile regression under the transnormal model, with focus on high-dimensional setting. We derive a surprisingly simple closed-form solution through rank-based covariance regularization. In particular, we propose the rank-based ℓ1 penalization with positive-definite constraints for estimating sparse covariance matrices, and the rank-based banded Cholesky decomposition regularization for estimating banded precision matrices. By taking…

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Extremal Depth for Functional Data and Applications

函数型数据的极端深度及其应用

We propose a new notion called “extremal depth” (ED) for functional data, discuss its properties, and compare its performance with existing concepts. The proposed notion is based on a measure of extreme “outlyingness.” ED has several desirable properties that are not shared by other notions and is especially well suited for obtaining central regions of functional data and function spaces. In particular: (a) the central region achieves the nominal (desired) simultaneous…

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On SURE-Type Double Shrinkage Estimation

基于 SURE 的双重收缩估计

The article is concerned with empirical Bayes shrinkage estimators for the heteroscedastic hierarchical normal model using Stein's unbiased estimate of risk (SURE). Recently, Xie, Kou, and Brown proposed a class of estimators for this type of problems and established their asymptotic optimality properties under the assumption of known but unequal variances. In this article, we consider this problem with unequal and unknown variances, which may be more appropriate in real…

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Testing the Predictor Effect on a Functional Response

预测变量对函数型响应影响的检验

This article examines the problem of nonparametric testing for the no-effect of a random covariate (or predictor) on a functional response. This means testing whether the conditional expectation of the response given the covariate is almost surely zero or not, without imposing any model relating response and covariate. The covariate could be univariate, multivariate, or functional. Our test statistic is a quadratic form involving univariate nearest neighbor smoothing and the…

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Inference for Monotone Functions Under Short- and Long-Range Dependence: Confidence Intervals and New Universal Limits

短程与长程依赖下单调函数的推断:置信区间与新的普适极限

We introduce new point-wise confidence interval estimates for monotone functions observed with additive, dependent noise. Our methodology applies to both short- and long-range dependence regimes for the errors. The interval estimates are obtained via the method of inversion of certain discrepancy statistics. This approach avoids the estimation of nuisance parameters such as the derivative of the unknown function, which previous methods are forced to deal with. The resulting…

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Accelerating Asymptotically Exact MCMC for Computationally Intensive Models via Local Approximations

用局部近似加速计算密集模型的渐近精确 MCMC

We construct a new framework for accelerating Markov chain Monte Carlo in posterior sampling problems where standard methods are limited by the computational cost of the likelihood, or of numerical models embedded therein. Our approach introduces local approximations of these models into the Metropolis–Hastings kernel, borrowing ideas from deterministic approximation theory, optimization, and experimental design. Previous efforts at integrating approximate models into…

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A Bayesian Approach to Graphical Record Linkage and Deduplication

图式记录链接与去重的贝叶斯方法

We propose an unsupervised approach for linking records across arbitrarily many files, while simultaneously detecting duplicate records within files. Our key innovation involves the representation of the pattern of links between records as a bipartite graph, in which records are directly linked to latent true individuals, and only indirectly linked to other records. This flexible representation of the linkage structure naturally allows us to estimate the attributes of the…

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Using Ranked Set Sampling With Cluster Randomized Designs for Improved Inference on Treatment Effects

在整群随机设计中使用排序集抽样改进处理效应推断

Xinlei Wanga, Johan Limb & Lynne Stokesa*a Department of Statistical Science, Southern Methodist University, Dallas, TX, USAb Seoul National University, Seoul, KoreaCONTACT Lynne Stokes slstokes@smu.edu Department of Statistical Science, Southern Methodist University, Dallas, TX 75275-0332.Color versions of one or more of the figures in the article can be found online at www.tandfonline.com/r/JASA.Supplementary materials for this article are available online. Please go to…

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Fast Bayesian Factor Analysis via Automatic Rotations to Sparsity

通过自动稀疏旋转实现快速贝叶斯因子分析

Rotational post hoc transformations have traditionally played a key role in enhancing the interpretability of factor analysis. Regularization methods also serve to achieve this goal by prioritizing sparse loading matrices. In this work, we bridge these two paradigms with a unifying Bayesian framework. Our approach deploys intermediate factor rotations throughout the learning process, greatly enhancing the effectiveness of sparsity inducing priors. These automatic rotations…

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Identifiability of Normal and Normal Mixture Models with Nonignorable Missing Data

非可忽略缺失下正态及正态混合模型的可识别性

Missing data problems arise in many applied research studies. They may jeopardize statistical inference of the model of interest, if the missing mechanism is nonignorable, that is, the missing mechanism depends on the missing values themselves even conditional on the observed data. With a nonignorable missing mechanism, the model of interest is often not identifiable without imposing further assumptions. We find that even if the missing mechanism has a known parametric form,…

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Improving and Evaluating Topic Models and Other Models of Text

An ongoing challenge in the analysis of document collections is how to summarize content in terms of a set of inferred themes that can be interpreted substantively in terms of topics. The current practice of parameterizing the themes in terms of most frequent words limits interpretability by ignoring the differential use of words across topics. Here, we show that words that are both frequent and exclusive to a theme are more effective at characterizing topical content, and…

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评论:多阶段化疗方案的 Q-learning 与 O-learning

Xu, Müller, Wahed, and Thall proposed a Bayesian model to analyze an acute leukemia study involving multi-stage chemotherapy regimes. We discuss two alternative methods, Q-learning and O-learning, to solve the same problem from the machine learning point of view. The numerical studies show that these methods can be flexible and have advantages in some situations to handle treatment heterogeneity while being robust to model misspecification.

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Analysis of Proportional Odds Models With Censoring and Errors-in-Covariates

存在删失与协变量测量误差的比例优势模型分析

We propose a consistent method for estimating both the finite- and infinite-dimensional parameters of the proportional odds model when a covariate is subject to measurement error and time-to-events are subject to right censoring. The proposed method does not rely on the distributional assumption of the true covariate, which is not observed in the data. In addition, the proposed estimator does not require the measurement error to be normally distributed or to have any other…

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Sufficient Reductions in Regressions With Exponential Family Inverse Predictors

指数族逆向预测变量回归中的充分降维

We develop methodology for identifying and estimating sufficient reductions in regressions with predictors that, given the response, follow a multivariate exponential family distribution. This setup includes regressions where predictors are all continuous, all categorical, or mixtures of categorical and continuous. We derive the minimal sufficient reduction of the predictors and its maximum likelihood estimator by modeling the conditional distribution of the predictors given…

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A Longitudinal Mixed Logit Model for Estimation of Push and Pull Effects in Residential Location Choice

用于居住区位选择推拉效应估计的纵向混合 Logit 模型

We develop a random effects discrete choice model for the analysis of households’ choice of neighborhood over time. The model is parameterized in a way that exploits longitudinal data to separate the influence of neighborhood characteristics on the decision to move out of the current area (“push” effects) and on the choice of one destination over another (“pull” effects). Random effects are included to allow for unobserved heterogeneity between households in their propensity…

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Probabilistic Cause-of-Death Assignment Using Verbal Autopsies

利用口头尸检进行概率死因判定

In regions without complete-coverage civil registration and vital statistics systems there is uncertainty about even the most basic demographic indicators. In such regions, the majority of deaths occur outside hospitals and are not recorded. Worldwide, fewer than one-third of deaths are assigned a cause, with the least information available from the most impoverished nations. In populations like this, verbal autopsy (VA) is a commonly used tool to assess cause of death and…

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Hierarchical Models for Semicompeting Risks Data With Application to Quality of End-of-Life Care for Pancreatic Cancer

半竞争风险数据的层级模型:胰腺癌临终照护质量应用

Readmission following discharge from an initial hospitalization is a key marker of quality of healthcare in the United States. For the most part, readmission has been studied among patients with “acute” health conditions, such as pneumonia and heart failure, with analyses based on a logistic-Normal generalized linear mixed model. Naïve application of this model to the study of readmission among patients with “advanced” health conditions such as pancreatic cancer, however, is…

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Generalized Fiducial Inference: A Review and New Results

广义信赖推断:综述与新结果

R. A. Fisher, the father of modern statistics, proposed the idea of fiducial inference during the first half of the 20th century. While his proposal led to interesting methods for quantifying uncertainty, other prominent statisticians of the time did not accept Fisher’s approach as it became apparent that some of Fisher’s bold claims about the properties of fiducial distribution did not hold up for multi-parameter problems. Beginning around the year 2000, the authors and…

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Detecting and Localizing Differences in Functional Time Series Dynamics: A Case Study in Molecular Biophysics

函数型时间序列动态差异的检测与定位:分子生物物理案例

Motivated by the problem of inferring the molecular dynamics of DNA in solution, and linking them with its base-pair composition, we consider the problem of comparing the dynamics of functional time series (FTS), and of localizing any inferred differences in frequency and along curvelength. The approach we take is one of Fourier analysis, where the complete second-order structure of the FTS is encoded by its spectral density operator, indexed by frequency and curvelength.…

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Estimation of Directed Acyclic Graphs Through Two-Stage Adaptive Lasso for Gene Network Inference

用于基因网络推断的两阶段自适应 Lasso 有向无环图估计

Graphical models are a popular approach to find dependence and conditional independence relationships between gene expressions. Directed acyclic graphs (DAGs) are a special class of directed graphical models, where all the edges are directed edges and contain no directed cycles. The DAGs are well known models for discovering causal relationships between genes in gene regulatory networks. However, estimating DAGs without assuming known ordering is challenging due to high…

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Template-Based Models for Genome-Wide Analysis of Next-Generation Sequencing Data at Base-Pair Resolution

基于模板的碱基对分辨率全基因组测序分析模型

We consider the problem of estimating the genome-wide distribution of nucleosome positions from paired-end sequencing data. We develop a modeling approach based on nonparametric templates to control for the variability along the sequence of read counts associated with nucleosomal DNA due to enzymatic digestion and other sample preparation steps, and we develop a calibrated Bayesian method to detect local concentrations of nucleosome positions. We also introduce a set of…

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Analyzing Single-Molecule Protein Transportation Experiments via Hierarchical Hidden Markov Models

通过分层隐马尔可夫模型分析单分子蛋白质运输实验

To maintain proper cellular functions, over 50% of proteins encoded in the genome need to be transported to cellular membranes. The molecular mechanism behind such a process, often referred to as protein targeting, is not well understood. Single-molecule experiments are designed to unveil the detailed mechanisms and reveal the functions of different molecular machineries involved in the process. The experimental data consist of hundreds of stochastic time traces from the…

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Model-Based Geostatistics for Prevalence Mapping in Low-Resource Settings

资源有限环境下患病率制图的模型化地统计方法

In low-resource settings, prevalence mapping relies on empirical prevalence data from a finite, often spatially sparse, set of surveys of communities within the region of interest, possibly supplemented by remotely sensed images that can act as proxies for environmental risk factors. A standard geostatistical model for data of this kind is a generalized linear mixed model with binomial error distribution, logistic link, and a combination of explanatory variables and a…

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How Much Information Does Dependence Between Wavelet Coefficients Contain?

小波系数之间的依赖包含多少信息?

This article is motivated by several articles that propose statistical inference where the independence of wavelet coefficients for both short- as well as long-range dependent time series is assumed. We focus on the sample variance and investigate the influence of the dependence between wavelet coefficients and this statistic. To this end, we derive asymptotic distributional properties of the sample variance for a time series that is synthesized, ignoring some or all…

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