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Front-Door Versus Back-Door Adjustment With Unmeasured Confounding: Bias Formulas for Front-Door and Hybrid Adjustments With Application to a Job Training Program

存在未测混杂时的前门与后门调整:前门及混合调整的偏差公式与职业培训应用

We demonstrate that the front-door adjustment can be a useful alternative to standard covariate adjustments (i.e., back-door adjustments), even when the assumptions required for the front-door approach do not hold. We do this by providing asymptotic bias formulas for the front-door approach that can be compared directly to bias formulas for the back-door approach. In some cases, this allows the tightening of bounds on treatment effects. We also show that under one-sided…

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Maximum Rank Reproducibility: A Nonparametric Approach to Assessing Reproducibility in Replicate Experiments

最大秩可重复性:评估重复实验可重复性的非参数方法

The identification of reproducible signals from the results of replicate high-throughput experiments is an important part of modern biological research. Often little is known about the dependence structure and the marginal distribution of the data, motivating the development of a nonparametric approach to assess reproducibility. The procedure, which we call the maximum rank reproducibility (MaRR) procedure, uses a maximum rank statistic to parse reproducible signals from…

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Modeling Motor Learning Using Heteroscedastic Functional Principal Components Analysis

使用异方差函数主成分分析建模运动学习

We propose a novel method for estimating population-level and subject-specific effects of covariates on the variability of functional data. We extend the functional principal components analysis framework by modeling the variance of principal component scores as a function of covariates and subject-specific random effects. In a setting where principal components are largely invariant across subjects and covariate values, modeling the variance of these scores provides a…

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Robust High-Dimensional Volatility Matrix Estimation for High-Frequency Factor Model

高频因子模型中高维波动率矩阵的稳健估计

High-frequency financial data allow us to estimate large volatility matrices with relatively short time horizon. Many novel statistical methods have been introduced to address large volatility matrix estimation problems from a high-dimensional Itô process with microstructural noise contamination. Their asymptotic theories require sub-Gaussian or some finite high-order moments assumptions for observed log-returns. These assumptions are at odd with the heavy tail phenomenon…

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A Bayesian Machine Learning Approach for Optimizing Dynamic Treatment Regimes

优化动态治疗方案的贝叶斯机器学习方法

Medical therapy often consists of multiple stages, with a treatment chosen by the physician at each stage based on the patient's history of treatments and clinical outcomes. These decisions can be formalized as a dynamic treatment regime. This paper describes a new approach for optimizing dynamic treatment regimes that bridges the gap between Bayesian inference and existing approaches, like Q-learning. The proposed approach fits a series of Bayesian regression models, one…

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Functional Feature Construction for Individualized Treatment Regimes

个体化治疗方案的函数型特征构造

Evidence-based personalized medicine formalizes treatment selection as an individualized treatment regime that maps up-to-date patient information into the space of possible treatments. Available patient information may include static features such race, gender, family history, genetic and genomic information, as well as longitudinal information including the emergence of comorbidities, waxing and waning of symptoms, side-effect burden, and adherence. Dynamic information…

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A Randomized Sequential Procedure to Determine the Number of Factors

确定因子数量的随机化序贯程序

This article proposes a procedure to estimate the number of common factors k in a static approximate factor model. The building block of the analysis is the fact that the first k eigenvalues of the covariance matrix of the data diverge, while the others stay bounded. On the grounds of this, we propose a test for the null that the ith eigenvalue diverges, using a randomized test statistic based directly on the estimated eigenvalue. The test only requires minimal assumptions…

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Assessing Time-Varying Causal Effect Moderation in Mobile Health

移动健康干预中的时变因果效应调节评估

In mobile health interventions aimed at behavior change and maintenance, treatments are provided in real time to manage current or impending high risk situations or promote healthy behaviors in near real time. Currently there is great scientific interest in developing data analysis approaches to guide the development of mobile interventions. In particular data from mobile health studies might be used to examine effect moderators-individual characteristics, time-varying…

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Cross-Screening in Observational Studies That Test Many Hypotheses

多假设观察性研究中的交叉筛选

We discuss observational studies that test many causal hypotheses, either hypotheses about many outcomes or many treatments. To be credible an observational study that tests many causal hypotheses must demonstrate that its conclusions are neither artifacts of multiple testing nor of small biases from nonrandom treatment assignment. In a sense that needs to be defined carefully, hidden within a sensitivity analysis for nonrandom assignment is an enormous correction for…

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A Bayesian Phase I/II Trial Design for Immunotherapy

免疫治疗的贝叶斯 I/II 期临床试验设计

Immunotherapy is an innovative treatment approach that stimulates a patient's immune system to fight cancer. It demonstrates characteristics distinct from conventional chemotherapy and stands to revolutionize cancer treatment. We propose a Bayesian phase I/II dosefinding design that incorporates the unique features of immunotherapy by simultaneously considering three outcomes: immune response, toxicity and efficacy. The objective is to identify the biologically optimal dose,…

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Latent Variable Poisson Models for Assessing the Regularity of Circadian Patterns over Time

评估昼夜节律随时间规律性的潜变量泊松模型

Many researchers in biology and medicine have focused on trying to understand biological rhythms and their potential impact on disease. A common biological rhythm is circadian, where the cycle repeats itself every 24 hours. However, a disturbance of the circadian pattern may be indicative of future disease. In this article, we develop new statistical methodology for assessing the degree of disturbance or irregularity in a circadian pattern for count sequences that are…

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Optimal Probability Weights for Inference With Constrained Precision

精度约束下用于推断的最优概率权重

Probability weights are used in many areas of research including complex survey designs, missing data analysis, and adjustment for confounding factors. They are useful analytic tools but can lead to statistical inefficiencies when they contain outlying values. This issue is frequently tackled by replacing large weights with smaller ones or by normalizing them through smoothing functions. While these approaches are practical, they are also prone to yield biased inferences.…

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Controlling the FDR in Imperfect Matches to an Incomplete Database

不完整数据库中不完美匹配的错误发现率控制

We consider the problem of controlling the FDR among discoveries from searching an incomplete database. This problem differs from the classical multiple testing setting because there are two different types of false discoveries: those arising from objects that have no match in the database and those that are incorrectly matched. We show that commonly used FDR controlling procedures are inadequate for this setup, a special case of which is tandem mass spectrum identification.…

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Confidence Regions for Spatial Excursion Sets From Repeated Random Field Observations, With an Application to Climate

重复随机场观测下空间超阈值集合的置信区域及气候应用

The goal of this paper is to give confidence regions for the excursion set of a spatial function above a given threshold from repeated noisy observations on a fine grid of fixed locations. Given an asymptotically Gaussian estimator of the target function, a pair of data-dependent nested excursion sets are constructed that are sub- and super-sets of the true excursion set, respectively, with a desired confidence. Asymptotic coverage probabilities are determined via a…

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Modeling Persistent Trends in Distributions

分布中持续趋势的建模

We present a nonparametric framework to model a short sequence of probability distributions that vary both due to underlying effects of sequential progression and confounding noise. To distinguish between these two types of variation and estimate the sequential-progression effects, our approach leverages an assumption that these effects follow a persistent trend. This work is motivated by the recent rise of single-cell RNA-sequencing experiments over a brief time course,…

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Edge Exchangeable Models for Interaction Networks

交互网络的边可交换模型

Many modern network datasets arise from processes of interactions in a population, such as phone calls, email exchanges, co-authorships, and professional collaborations. In such interaction networks, the edges comprise the fundamental statistical units, making a framework for edge-labeled networks more appropriate for statistical analysis. In this context, we initiate the study of edge exchangeable network models and explore its basic statistical properties. Several…

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Weighted False Discovery Rate Control in Large-Scale Multiple Testing

大规模多重检验中的加权错误发现率控制

The use of weights provides an effective strategy to incorporate prior domain knowledge in large-scale inference. This paper studies weighted multiple testing in a decision-theoretic framework. We develop oracle and data-driven procedures that aim to maximize the expected number of true positives subject to a constraint on the weighted false discovery rate. The asymptotic validity and optimality of the proposed methods are established. The results demonstrate that…

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On the Null Distribution of Bayes Factors in Linear Regression

线性回归中贝叶斯因子的零假设分布

We show that under the null, the 2 log(Bayes factor) is asymptotically distributed as a weighted sum of chi-squared random variables with a shifted mean. This claim holds for Bayesian multi-linear regression with a family of conjugate priors, namely, the normal-inverse-gamma prior, the g-prior, and the normal prior. Our results have three immediate impacts. First, we can compute analytically a p-value associated with a Bayes factor without the need of permutation. We provide…

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Oracle Estimation of a Change Point in High-Dimensional Quantile Regression

高维分位数回归中变点的预言式估计

In this paper, we consider a high-dimensional quantile regression model where the sparsity structure may differ between two sub-populations. We develop $\ell_1$-penalized estimators of both regression coefficients and the threshold parameter. Our penalized estimators not only select covariates but also discriminate between a model with homogeneous sparsity and a model with a change point. As a result, it is not necessary to know or pretest whether the change point is…

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Identifying Latent Structures in Restricted Latent Class Models

受限潜类别模型中潜在结构的识别

This article focuses on a family of restricted latent structure models with wide applications in psychological and educational assessment, where the model parameters are restricted via a latent structure matrix to reflect prespecified assumptions on the latent attributes. Such a latent matrix is often provided by experts and assumed to be correct upon construction, yet it may be subjective and misspecified. Recognizing this problem, researchers have been developing methods…

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On the Use of Reproducing Kernel Hilbert Spaces in Functional Classification

再生核希尔伯特空间在函数型分类中的应用

The Hájek–Feldman dichotomy establishes that two Gaussian measures are either mutually absolutely continuous with respect to each other (and hence there is a Radon–Nikodym density for each measure with respect to the other one) or mutually singular. Unlike the case of finite-dimensional Gaussian measures, there are nontrivial examples of both situations when dealing with Gaussian stochastic processes. This article provides: (a) Explicit expressions for the optimal (Bayes)…

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Quantile-Optimal Treatment Regimes

分位数最优治疗规则

Finding the optimal treatment regime (or a series of sequential treatment regimes) based on individual characteristics has important applications in areas such as precision medicine, government policies and active labor market interventions. In the current literature, the optimal treatment regime is usually defined as the one that maximizes the average benefit in the potential population. This paper studies a general framework for estimating the quantile-optimal treatment…

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Inference in Linear Regression Models with Many Covariates and Heteroscedasticity

多协变量与异方差线性回归模型中的推断

The linear regression model is widely used in empirical work in economics, statistics, and many other disciplines. Researchers often include many covariates in their linear model specification in an attempt to control for confounders. We give inference methods that allow for many covariates and heteroscedasticity. Our results are obtained using high-dimensional approximations, where the number of included covariates is allowed to grow as fast as the sample size. We find that…

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Distribution-Free Predictive Inference for Regression

回归中的分布无关预测推断

We develop a general framework for distribution-free predictive inference in regression, using conformal inference. The proposed methodology allows for the construction of a prediction band for the response variable using any estimator of the regression function. The resulting prediction band preserves the consistency properties of the original estimator under standard assumptions, while guaranteeing finite-sample marginal coverage even when these assumptions do not hold. We…

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