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Placebo Response as a Latent Characteristic: Application to Analysis of Sequential Parallel Comparison Design Studies

将安慰剂反应视为潜在特征:序贯平行比较设计研究的分析

In clinical trials, placebo response can affect the inference about efficacy of the studied treatment. It is important to have a robust way to classify trial subjects with respect to their response to placebo. Simple, criterion-based classification may lead to classification error and bias the inference. The uncertainty about placebo response characteristic has to be factored into the treatment effect estimation. We propose a novel approach that views the placebo response as…

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A Powerful Bayesian Test for Equality of Means in High Dimensions

高维均值相等性的高功效贝叶斯检验

We develop a Bayes factor-based testing procedure for comparing two population means in high-dimensional settings. In ‘large-p-small-n” settings, Bayes factors based on proper priors require eliciting a large and complex p × p covariance matrix, whereas Bayes factors based on Jeffrey’s prior suffer the same impediment as the classical Hotelling T2 test statistic as they involve inversion of ill-formed sample covariance matrices. To circumvent this limitation, we propose that…

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Malware Family Discovery Using Reversible Jump MCMC Sampling of Regimes

利用状态区段的可逆跳跃 MCMC 发现恶意软件家族

Malware is computer software that has either been designed or modified with malicious intent. Hundreds of thousands of new malware threats appear on the internet each day. This is made possible through reuse of known exploits in computer systems that have not been fully eradicated; existing pieces of malware can be trivially modified and combined to create new malware, which is unknown to anti-virus programs. Finding new software with similarities to known malware is…

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Modeling Random Effects Using Global–Local Shrinkage Priors in Small Area Estimation

小区域估计中采用全局—局部收缩先验建模随机效应

Small area estimation is becoming increasingly popular for survey statisticians. One very important program is Small Area Income and Poverty Estimation undertaken by the United States Bureau of the Census, which aims at providing estimates related to income and poverty based on American Community Survey data at the state level and even at lower levels of geography. This article introduces global–local (GL) shrinkage priors for random effects in small area estimation to…

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Tracking the Impact of Media on Voter Choice in Real Time: A Bayesian Dynamic Joint Model

实时追踪媒体对选民选择的影响:贝叶斯动态联合模型

Commonly used methods of evaluating the impact of marketing communications during political elections struggle to account for respondents’ exposures to these communications due to the problems associated with recall bias. In addition, they completely fail to account for the impact of mediated or earned communications, such as newspaper articles or television news, that are typically not within the control of the advertising party, nor are they effectively able to monitor…

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Polynomial Accelerated Solutions to a Large Gaussian Model for Imaging Biofilms: In Theory and Finite Precision

生物膜成像大型高斯模型的多项式加速求解:理论与有限精度

Three dimensional confocal scanning laser microscope images offer dramatic visualizations of the action of living biofilms before and after interventions. Here we use confocal microscopy to study the effect of a treatment over time that causes a biofilm to swell and contract due to osmotic pressure changes. From these data, our goal is to reconstruct biofilm surfaces, to estimate the effect of the treatment on the biofilm's volume, and to quantify the related uncertainties.…

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Bayesian Semiparametric Mixed Effects Markov Models With Application to Vocalization Syntax

贝叶斯半参数混合效应马尔可夫模型及发声语法应用

Studying the neurological, genetic, and evolutionary basis of human vocal communication mechanisms using animal vocalization models is an important field of neuroscience. The datasets typically comprise structured sequences of syllables or “songs” produced by animals from different genotypes under different social contexts. It has been difficult to come up with sophisticated statistical methods that appropriately model animal vocal communication syntax. We address this need…

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An Efficient Surrogate Model for Emulation and Physics Extraction of Large Eddy Simulations

大涡模拟的高效代理模型与物理机制提取

In the quest for advanced propulsion and power-generation systems, high-fidelity simulations are too computationally expensive to survey the desired design space, and a new design methodology is needed that combines engineering physics, computer simulations, and statistical modeling. In this article, we propose a new surrogate model that provides efficient prediction and uncertainty quantification of turbulent flows in swirl injectors with varying geometries, devices…

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Sparsity Oriented Importance Learning for High-Dimensional Linear Regression

高维线性回归中面向稀疏性的变量重要性学习

With now well-recognized nonnegligible model selection uncertainty, data analysts should no longer be satisfied with the output of a single final model from a model selection process, regardless of its sophistication. To improve reliability and reproducibility in model choice, one constructive approach is to make good use of a sound variable importance measure. Although interesting importance measures are available and increasingly used in data analysis, little theoretical…

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Post-Selection Inference Following Aggregate Level Hypothesis Testing in Large-Scale Genomic Data

大规模基因组数据中聚合层检验后的选择后推断

In many genomic applications, hypotheses tests are performed for powerful identification of signals by aggregating test-statistics across units within naturally defined classes. Following class-level testing, it is naturally of interest to identify the lower level units which contain true signals. Testing the individual units within a class without taking into account the fact that the class was selected using an aggregate-level test-statistic, will produce biased inference.…

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Inference Under Covariate-Adaptive Randomization

协变量自适应随机化下的推断

This article studies inference for the average treatment effect in randomized controlled trials with covariate-adaptive randomization. Here, by covariate-adaptive randomization, we mean randomization schemes that first stratify according to baseline covariates and then assign treatment status so as to achieve “balance” within each stratum. Our main requirement is that the randomization scheme assigns treatment status within each stratum so that the fraction of units being…

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Tractable Bayesian Variable Selection: Beyond Normality

超越正态假设的可处理贝叶斯变量选择

Bayesian variable selection often assumes normality, but the effects of model misspecification are not sufficiently understood. There are sound reasons behind this assumption, particularly for large p: ease of interpretation, analytical, and computational convenience. More flexible frameworks exist, including semi- or nonparametric models, often at the cost of some tractability. We propose a simple extension that allows for skewness and thicker-than-normal tails but…

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Over-Dispersed Age-Period-Cohort Models

过度离散的年龄—时期—队列模型

We consider inference and forecasting for aggregate data organized in a two-way table with age and cohort as indices, but without measures of exposure. This is modeled using a Poisson likelihood with an age-period-cohort structure for the mean while allowing for over-dispersion. We propose a repetitive structure that keeps the dimension of the table fixed while increasing the latent exposure. For this, we use a class of infinitely divisible distributions which include a…

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Bayesian Estimation and Comparison of Moment Condition Models

矩条件模型的贝叶斯估计与比较

In this article, we develop a Bayesian semiparametric analysis of moment condition models by casting the problem within the exponentially tilted empirical likelihood (ETEL) framework. We use this framework to develop a fully Bayesian analysis of correctly and misspecified moment condition models. We show that even under misspecification, the Bayesian ETEL posterior distribution satisfies the Bernstein–von Mises (BvM) theorem. We also develop a unified approach based on…

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Sparse Pairwise Likelihood Estimation for Multivariate Longitudinal Mixed Models

多元纵向混合模型的稀疏成对似然估计

It is becoming increasingly common in longitudinal studies to collect and analyze data on multiple responses. For example, in the social sciences we may be interested in uncovering the factors driving mental health of individuals over time, where mental health is measured using a set of questionnaire items. One approach to analyzing such multi-dimensional data is multivariate mixed models, an extension of the standard univariate mixed model to handle multiple responses.…

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Bayesian Approximate Kernel Regression With Variable Selection

带变量选择的贝叶斯近似核回归

Nonlinear kernel regression models are often used in statistics and machine learning because they are more accurate than linear models. Variable selection for kernel regression models is a challenge partly because, unlike the linear regression setting, there is no clear concept of an effect size for regression coefficients. In this paper, we propose a novel framework that provides an effect size analog for each explanatory variable in Bayesian kernel regression models when…

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Particle EM for Variable Selection

用于变量选择的粒子 EM 算法

Despite its long history of success, the EM algorithm has been vulnerable to local entrapment when the posterior/likelihood is multi-modal. This is particularly pronounced in spike-and-slab posterior distributions for Bayesian variable selection. The main thrust of this article is to introduce the particle EM algorithm, a new population-based optimization strategy that harvests multiple modes in search spaces that present many local maxima. Motivated by nonparametric…

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Optimal Penalized Function-on-Function Regression Under a Reproducing Kernel Hilbert Space Framework

再生核希尔伯特空间下的最优惩罚函数对函数回归

Many scientific studies collect data where the response and predictor variables are both functions of time, location, or some other covariate. Understanding the relationship between these functional variables is a common goal in these studies. Motivated from two real-life examples, we present in this paper a function-on-function regression model that can be used to analyze such kind of functional data. Our estimator of the 2D coefficient function is the optimizer of a form…

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Reconciling Curvature and Importance Sampling Based Procedures for Summarizing Case Influence in Bayesian Models

统一贝叶斯个案影响分析中的曲率与重要性抽样方法

Methods for summarizing case influence in Bayesian models take essentially two forms: (1) use common divergence measures for calculating distances between the full-data posterior and the case-deleted posterior, and (2) measure the impact of infinitesimal perturbations to the likelihood to study local case influence. Methods based on approach (1) lead naturally to considering the behavior of case-deletion importance sampling weights (the weights used to approximate samples…

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Dynamic Modeling of Conditional Quantile Trajectories, With Application to Longitudinal Snippet Data

条件分位数轨迹的动态建模及其纵向短片段数据应用

Longitudinal data are often plagued with sparsity of time points where measurements are available. The functional data analysis perspective has been shown to provide an effective and flexible approach to address this problem for the case where measurements are sparse but their times are randomly distributed over an interval. Here, we focus on a different scenario where available data can be characterized as snippets, which are very short stretches of longitudinal…

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A Massive Data Framework for M-Estimators with Cubic-Rate

具有立方根收敛率的 M 估计量的大数据框架

The divide and conquer method is a common strategy for handling massive data. In this article, we study the divide and conquer method for cubic-rate estimators under the massive data framework. We develop a general theory for establishing the asymptotic distribution of the aggregated M-estimators using a weighted average with weights depending on the subgroup sample sizes. Under certain condition on the growing rate of the number of subgroups, the resulting aggregated…

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Modeling Tangential Vector Fields on a Sphere

球面切向向量场的建模

Physical processes that manifest as tangential vector fields on a sphere are common in geophysical and environmental sciences. These naturally occurring vector fields are often subject to physical constraints, such as being curl-free or divergence-free. We start with constructing parametric models for curl-free and divergence-free vector fields that are tangential to the unit sphere through applying the surface gradient or the surface curl operator to a scalar random…

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Probabilities of Concurrent Extremes

极端事件同时发生的概率

The statistical modeling of spatial extremes has been an active area of recent research with a growing domain of applications. Much of the existing methodology, however, focuses on the magnitudes of extreme events rather than on their timing. To address this gap, this article investigates the notion of extremal concurrence. Suppose that daily temperatures are measured at several synoptic stations. We say that extremes are concurrent if record maximum temperatures occur…

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Bayesian Inference in the Presence of Intractable Normalizing Functions

含难以计算的归一化函数时的贝叶斯推断

Models with intractable normalizing functions arise frequently in statistics. Common examples of such models include exponential random graph models for social networks and Markov point processes for ecology and disease modeling. Inference for these models is complicated because the normalizing functions of their probability distributions include the parameters of interest. In Bayesian analysis, they result in so-called doubly intractable posterior distributions which pose…

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