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Modeling Multiple Time-Varying Related Groups: A Dynamic Hierarchical Bayesian Approach With an Application to the Health and Retirement Study

多个时变关联群组的建模:动态层次贝叶斯方法及其在健康与退休研究中的应用

As the population of the older individuals continues to grow, it is important to study the relationship among the variables measuring financial health and physical health of the older individuals to better understand the demand for healthcare, and health insurance. We propose a semiparametric approach to jointly model these variables. We use data from the Health and Retirement Study which includes a set of correlated longitudinal variables measuring financial and physical…

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Discussion of Kallus (2020) and Mo, Qi, and Liu (2020): New Objectives for Policy Learning

讨论 Kallus 及 Mo、Qi、Liu(2020):政策学习的新目标

We congratulate Kallus and Mo, Qi, and Liu for introducing thought-provoking new policy learning objective functions. Each of the proposed objectives involves an empirical estimate of the value fun...

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Discussion of Kallus and Mo, Qi, and Liu: New Objectives for Policy Learning

对 Kallus 及 Mo、Qi、Liu 的讨论:政策学习的新目标

One of the key contributions that the causal inference literature has brought is a focus on clearly defined estimands. This focus has led to a real shift in the statistical approach (see, e.g., Dan...

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Parametric Modeling of Quantile Regression Coefficient Functions With Longitudinal Data

纵向数据分位数回归系数函数的参数化建模

In ordinary quantile regression, quantiles of different order are estimated one at a time. An alternative approach, which is referred to as quantile regression coefficients modeling (qrcm), is to model quantile regression coefficients as parametric functions of the order of the quantile. In this article, we describe how the qrcm paradigm can be applied to longitudinal data. We introduce a two-level quantile function, in which two different quantile regression models are used…

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Exponential-Family Embedding With Application to Cell Developmental Trajectories for Single-Cell RNA-Seq Data

指数族嵌入及其在单细胞 RNA 测序发育轨迹分析中的应用

Scientists often embed cells into a lower-dimensional space when studying single-cell RNA-seq data for improved downstream analyses such as developmental trajectory analyses, but the statistical properties of such nonlinear embedding methods are often not well understood. In this article, we develop the exponential-family SVD (eSVD), a nonlinear embedding method for both cells and genes jointly with respect to a random dot product model using exponential-family…

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Graphical Models for Processing Missing Data

用于缺失数据处理的图模型

This article reviews recent advances in missing data research using graphical models to represent multivariate dependencies. We first examine the limitations of traditional frameworks from three different perspectives: transparency, estimability, and testability. We then show how procedures based on graphical models can overcome these limitations and provide meaningful performance guarantees even when data are missing not at random (MNAR). In particular, we identify…

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Discovering Heterogeneous Exposure Effects Using Randomization Inference in Air Pollution Studies

利用随机化推断发现空气污染暴露效应的异质性

Several studies have provided strong evidence that long-term exposure to air pollution, even at low levels, increases risk of mortality. As regulatory actions are becoming prohibitively expensive, robust evidence to guide the development of targeted interventions to protect the most vulnerable is needed. In this article, we introduce a novel statistical method that (i) discovers subgroups whose effects substantially differ from the population mean, and (ii) uses…

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On Constraining Projections of Future Climate Using Observations and Simulations From Multiple Climate Models

利用观测与多气候模型模拟约束未来气候预测

Numerical climate models are used to project future climate change due to both anthropogenic and natural causes. Differences between projections from different climate models are a major source of uncertainty about future climate. Emergent relationships shared by multiple climate models have the potential to constrain our uncertainty when combined with historical observations. We combine projections from 13 climate models with observational data to quantify the impact of…

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Inter-Subject Analysis: A Partial Gaussian Graphical Model Approach

主体间依赖分析:部分高斯图模型方法

Different from traditional intra-subject analysis, the goal of inter-subject analysis (ISA) is to explore the dependency structure between different subjects with the intra-subject dependency as nuisance. ISA has important applications in neuroscience to study the functional connectivity between brain regions under natural stimuli. We propose a modeling framework for ISA that is based on Gaussian graphical models, under which ISA can be converted to the problem of estimation…

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Statistical Inference for Online Decision Making via Stochastic Gradient Descent

基于随机梯度下降的在线决策统计推断

Online decision making aims to learn the optimal decision rule by making personalized decisions and updating the decision rule recursively. It has become easier than before with the help of big data, but new challenges also come along. Since the decision rule should be updated once per step, an offline update which uses all the historical data is inefficient in computation and storage. To this end, we propose a completely online algorithm that can make decisions and update…

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Privacy-Preserving Parametric Inference: A Case for Robust Statistics

保护隐私的参数推断:稳健统计的作用

Differential privacy is a cryptographically motivated approach to privacy that has become a very active field of research over the last decade in theoretical computer science and machine learning. In this paradigm, one assumes there is a trusted curator who holds the data of individuals in a database and the goal of privacy is to simultaneously protect individual data while allowing the release of global characteristics of the database. In this setting, we introduce a…

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Auto-G-Computation of Causal Effects on a Network

网络因果效应的自动 g 计算

Methods for inferring average causal effects have traditionally relied on two key assumptions: (i) the intervention received by one unit cannot causally influence the outcome of another; and (ii) units can be organized into nonoverlapping groups such that outcomes of units in separate groups are independent. In this article, we develop new statistical methods for causal inference based on a single realization of a network of connected units for which neither assumption (i)…

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Learning Optimal Distributionally Robust Individualized Treatment Rules

学习最优分布鲁棒个体化治疗规则

Recent development in the data-driven decision science has seen great advances in individualized decision making. Given data with individual covariates, treatment assignments and outcomes, policy makers best individualized treatment rule (ITR) that maximizes the expected outcome, known as the value function. Many existing methods assume that the training and testing distributions are the same. However, the estimated optimal ITR may have poor generalizability when the…

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Rare Feature Selection in High Dimensions

高维稀有特征选择

It is common in modern prediction problems for many predictor variables to be counts of rarely occurring events. This leads to design matrices in which many columns are highly sparse. The challenge posed by such “rare features” has received little attention despite its prevalence in diverse areas, ranging from natural language processing (e.g., rare words) to biology (e.g., rare species). We show, both theoretically and empirically, that not explicitly accounting for the…

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Bias and High-Dimensional Adjustment in Observational Studies of Peer Effects

同伴效应观察性研究中的偏差与高维调整

Peer effects, in which an individual’s behavior is affected by peers’ behavior, are posited by multiple theories in the social sciences. Randomized field experiments that identify peer effects, however, are often expensive or infeasible, so many studies of peer effects use observational data, which is expected to suffer from confounding. Here we show, in the context of information and media diffusion, that high-dimensional adjustment of a nonexperimental control group (660…

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Bayesian Joint Modeling of Multiple Brain Functional Networks

多个脑功能网络的贝叶斯联合建模

Investigating the similarity and changes in brain networks under different mental conditions has become increasingly important in neuroscience research. A standard separate estimation strategy fails to pool information across networks and hence has reduced estimation accuracy and power to detect between-network differences. Motivated by a fMRI Stroop task experiment that involves multiple related tasks, we develop an integrative Bayesian approach for jointly modeling…

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Recurrent Events Analysis With Data Collected at Informative Clinical Visits in Electronic Health Records

信息性临床就诊下电子健康记录的重复事件分析

Although increasingly used as a data resource for assembling cohorts, electronic health records (EHRs) pose many analytic challenges. In particular, a patient's health status influences when and what data are recorded, generating sampling bias in the collected data. In this paper, we consider recurrent event analysis using EHR data. Conventional regression methods for event risk analysis usually require the values of covariates to be observed throughout the follow-up period.…

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Assessing Partial Association Between Ordinal Variables: Quantification, Visualization, and Hypothesis Testing

有序变量间偏关联的量化、可视化与假设检验

Partial association refers to the relationship between variables Y1,Y2,…,YK while adjusting for a set of covariates X={X1,…,Xp}. To assess such an association when Yk’s are recorded on ordinal scales, a classical approach is to use partial correlation between the latent continuous variables. This so-called polychoric correlation is inadequate, as it requires multivariate normality and it only reflects a linear association. We propose a new framework for studying…

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Inference on a New Class of Sample Average Treatment Effects

一类新的样本平均处理效应的统计推断

We derive new variance formulas for inference on a general class of estimands of causal average treatment effects in a randomized control trial. We generalize the seminal work of Robins and show that when the researcher’s objective is inference on sample average treatment effect of the treated (SATT), a consistent variance estimator exists. Although this estimand is equal to the sample average treatment effect (SATE) in expectation, potentially large differences in both…

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More Efficient Policy Learning via Optimal Retargeting

通过最优目标人群重设提高策略学习效率

Nathan Kallus* School of Operations Research and Information Engineering and Cornell Tech, Cornell University, New York, NYColor versions of one or more of the figures in the article can be found online at www.tandfonline.com/r/JASA.Supplementary materials for this article are available online. Please go to www.tandfonline.com/r/JASA.CONTACT Nathan Kallus kallus@cornell.edu School of Operations Research and Information Engineering and Cornell Tech, Cornell University, 2 West…

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Causal Inference With Interference and Noncompliance in Two-Stage Randomized Experiments

两阶段随机实验中存在干扰与不依从时的因果推断

In many social science experiments, subjects often interact with each other and as a result one unit’s treatment influences the outcome of another unit. Over the last decade, a significant progress has been made toward causal inference in the presence of such interference between units. Researchers have shown that the two-stage randomization of treatment assignment enables the identification of average direct and spillover effects. However, much of the literature has assumed…

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Bayesian Structure Learning in Multilayered Genomic Networks

多层基因组网络中的贝叶斯结构学习

Integrative network modeling of data arising from multiple genomic platforms provides insight into the holistic picture of the interactive system, as well as the flow of information across many disease domains including cancer. The basic data structure consists of a sequence of hierarchically ordered datasets for each individual subject, which facilitates integration of diverse inputs, such as genomic, transcriptomic, and proteomic data. A primary analytical task in such…

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Nonbifurcating Phylogenetic Tree Inference via the Adaptive LASSO

通过自适应 LASSO 推断非二叉系统发育树

Phylogenetic tree inference using deep DNA sequencing is reshaping our understanding of rapidly evolving systems, such as the within-host battle between viruses and the immune system. Densely sampled phylogenetic trees can contain special features, including sampled ancestors in which we sequence a genotype along with its direct descendants, and polytomies in which multiple descendants arise simultaneously. These features are apparent after identifying zero-length branches…

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Grouped Heterogeneous Mixture Modeling for Clustered Data

聚类数据的分组异质混合建模

Clustered data are ubiquitous in a variety of scientific fields. In this article, we propose a flexible and interpretable modeling approach, called grouped heterogeneous mixture modeling, for clustered data, which models cluster-wise conditional distributions by mixtures of latent conditional distributions common to all the clusters. In the model, we assume that clusters are divided into a finite number of groups and mixing proportions are the same within the same group. We…

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