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A Randomized Pairwise Likelihood Method for Complex Statistical Inferences

复杂统计推断的随机化成对似然方法

Pairwise likelihood methods are commonly used for inference in parametric statistical models in cases where the full likelihood is too complex to be used, such as multivariate count data. Although pairwise likelihood methods represent a useful solution to perform inference for intractable likelihoods, several computational challenges remain. The pairwise likelihood function still requires the computation of a sum over all pairs of variables and all observations, which may be…

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Graphical Model Inference with Erosely Measured Data

不规则测量数据下的高斯图模型推断

In this article, we investigate the Gaussian graphical model inference problem in a novel setting that we call erose measurements, referring to irregularly measured or observed data. For graphs, this results in different node pairs having vastly different sample sizes which frequently arises in data integration, genomics, neuroscience, and sensor networks. Existing works characterize the graph selection performance using the minimum pairwise sample size, which provides…

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Generalized Bayesian Inference for Discrete Intractable Likelihood

离散难计算似然的广义贝叶斯推断

Discrete state spaces represent a major computational challenge to statistical inference, since the computation of normalization constants requires summation over large or possibly infinite sets, which can be impractical. This article addresses this computational challenge through the development of a novel generalized Bayesian inference procedure suitable for discrete intractable likelihood. Inspired by recent methodological advances for continuous data, the main idea is to…

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Nonparametric Finite Mixture: Applications in Overcoming Misclassification Bias

非参数有限混合:克服误分类偏误的应用

Investigating the differential effect of treatments in groups defined by patient characteristics is of paramount importance in personalized medicine research. In some studies, participants are first classified as having or not of the characteristic of interest by diagnostic tools, but such classifiers may not be perfectly accurate. The impact of diagnostic misclassification in statistical inference has been recently investigated in parametric model contexts and shown to…

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Semiparametrically Efficient Method for Enveloped Central Space

包络中心子空间的半参数有效估计

The estimation of the central space is at the core of the sufficient dimension reduction (SDR) literature. However, it is well known that the finite-sample estimation suffers from collinearity among predictors. Cook et al. (2013) proposed the predictor envelope method under linear models that can alleviate the problem by targeting a bigger space - which not only envelopes the central information, but also partitions the predictors by finding an uncorrelated set of material…

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Unified Unconditional Regression for Multivariate Quantiles, M-Quantiles, and Expectiles

多元分位数、M分位数与期望分位数的统一无条件回归

In this article, we develop a unified regression approach to model unconditional quantiles, M-quantiles and expectiles of multivariate dependent variables exploiting the multidimensional Huber’s function. To assess the impact of changes in the covariates across the entire unconditional distribution of the responses, we extend the work of Firpo, Fortin, and Lemieux by running a mean regression of the recentered influence function on the explanatory variables. We discuss the…

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A Nonstationary Soft Partitioned Gaussian Process Model via Random Spanning Trees

基于随机生成树的非平稳软分区高斯过程模型

There has been a long-standing challenge in developing locally stationary Gaussian process models concerning how to obtain flexible partitions and make predictions near boundaries. In this work, we develop a new class of locally stationary stochastic processes, where local partitions are modeled by a soft partition process via predictive random spanning trees that leads to highly flexible spatially contiguous subregion shapes. This valid nonstationary process model knits…

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Estimation and Inference of Extremal Quantile Treatment Effects for Heavy-Tailed Distributions

重尾分布下极端分位数处理效应的估计与推断

Causal inference for extreme events has many potential applications in fields such as climate science, medicine and economics. We study the extremal quantile treatment effect of a binary treatment on a continuous, heavy-tailed outcome. Existing methods are limited to the case where the quantile of interest is within the range of the observations. For applications in risk assessment, however, the most relevant cases relate to extremal quantiles that go beyond the data range.…

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Unveiling the Unobservable: Causal Inference on Multiple Derived Outcomes

揭示不可观测量:多个衍生结果的因果推断

In many applications, the interest is in treatment effects on random quantities of subjects, where those random quantities are not directly observable but can be estimated based on data from each subject. In this article, we propose a general framework for conducting causal inference in a hierarchical data generation setting. The identifiability of causal parameters of interest is shown under a condition on the biasedness of subject level estimates and an ignorability…

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A Negative Correlation Strategy for Bracketing in Difference-in-Differences

双重差分中构造效应界限的负相关策略

The method of difference-in-differences (DID) is widely used to study the causal effect of policy interventions in observational studies. DID employs a before and after comparison of the treated and control units to remove bias due to time-invariant unmeasured confounders under the parallel trends assumption. Estimates from DID, however, will be biased if the outcomes for the treated and control units evolve differently in the absence of treatment, namely if the parallel…

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Exact Decoding of a Sequentially Markov Coalescent Model in Genetics

遗传学序列马尔可夫溯祖模型的精确解码

In statistical genetics, the sequentially Markov coalescent (SMC) is an important family of models for approximating the distribution of genetic variation data under complex evolutionary models. Methods based on SMC are widely used in genetics and evolutionary biology, with significant applications to genotype phasing and imputation, recombination rate estimation, and inferring population history. SMC allows for likelihood-based inference using hidden Markov models (HMMs),…

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Spectral Clustering, Bayesian Spanning Forest, and Forest Process

谱聚类、贝叶斯生成森林与森林过程

Spectral clustering views the similarity matrix as a weighted graph, and partitions the data by minimizing a graph-cut loss. Since it minimizes the across-cluster similarity, there is no need to model the distribution within each cluster. As a result, one reduces the chance of model misspecification, which is often a risk in mixture model-based clustering. Nevertheless, compared to the latter, spectral clustering has no direct ways of quantifying the clustering uncertainty…

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Empirical Likelihood for Network Data

网络数据的经验似然

This article develops a concept of nonparametric likelihood for network data based on network moments, and proposes general inference methods by adapting the theory of jackknife empirical likelihood. Our methodology can be used not only to conduct inference on population network moments and parameters in network formation models, but also to implement goodness-of-fit testing, such as testing block size for stochastic block models. Theoretically we show that the jackknife…

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Inference in High-Dimensional Multivariate Response Regression with Hidden Variables

存在隐变量的高维多响应回归推断

This article studies the inference of the regression coefficient matrix under multivariate response linear regressions in the presence of hidden variables. A novel procedure for constructing confidence intervals of entries of the coefficient matrix is proposed. Our method first uses the multivariate nature of the responses by estimating and adjusting the hidden effect to construct an initial estimator of the coefficient matrix. By further deploying a low-dimensional…

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PCABM: Pairwise Covariates-Adjusted Block Model for Community Detection

PCABM:用于社区检测的成对协变量调整块模型

One of the most fundamental problems in network study is community detection. The stochastic block model (SBM) is a widely used model, and various estimation methods have been developed with their community detection consistency results unveiled. However, the SBM is restricted by the strong assumption that all nodes in the same community are stochastically equivalent, which may not be suitable for practical applications. We introduce a pairwise covariates-adjusted stochastic…

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High-Dimensional Time Series Segmentation via Factor-Adjusted Vector Autoregressive Modeling

基于因子调整向量自回归的高维时间序列分段

Vector autoregressive (VAR) models are popularly adopted for modelling high-dimensional time series, and their piecewise extensions allow for structural changes in the data. In VAR modelling, the number of parameters grow quadratically with the dimensionality which necessitates the sparsity assumption in high dimensions. However, it is debatable whether such an assumption is adequate for handling datasets exhibiting strong serial and cross-sectional correlations. We propose…

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De-confounding Causal Inference Using Latent Multiple-Mediator Pathways

利用潜在多中介路径消除因果推断中的混杂

Causal effect estimation from observational data is one of the essential problems in causal inference. However, most estimation methods rely on the strong assumption that all confounders are observed, which is impractical and untestable in the real world. We develop a mediation analysis framework inferring the latent confounder for debiasing both direct and indirect causal effects. Specifically, we introduce generalized structural equation modeling that incorporates…

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Sensitivity to Unobserved Confounding in Studies with Factor-Structured Outcomes

因子结构结果研究中对未观测混杂的敏感性分析

In this work, we propose an approach for assessing sensitivity to unobserved confounding in studies with multiple outcomes. We demonstrate how prior knowledge unique to the multi-outcome setting can be leveraged to strengthen causal conclusions beyond what can be achieved from analyzing individual outcomes in isolation. We argue that it is often reasonable to make a shared confounding assumption, under which residual dependence amongst outcomes can be used to simplify and…

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Estimating Trans-Ancestry Genetic Correlation with Unbalanced Data Resources

数据资源不平衡下的跨祖源遗传相关性估计

The aim of this paper is to propose a novel method for estimating trans-ancestry genetic correlations in genome-wide association studies (GWAS) using genetically-predicted observations. These correlations describe how genetic architecture of complex traits varies among populations. Our new estimator corrects for biases arising from prediction errors in high-dimensional weak GWAS signals, while addressing the ethnic diversity inherent in GWAS data, such as linkage…

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Addressing Multiple Detection Limits with Semiparametric Cumulative Probability Models

用半参数累积概率模型处理多重检测限

Detection limits (DLs), where a variable cannot be measured outside of a certain range, are common in research. DLs may vary across study sites or over time. Most approaches to handling DLs in response variables implicitly make strong parametric assumptions on the distribution of data outside DLs. We propose a new approach to deal with multiple DLs based on a widely used ordinal regression model, the cumulative probability model (CPM). The CPM is a rank-based, semiparametric…

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Heterogeneity Analysis on Multi-State Brain Functional Connectivity and Adolescent Neurocognition

多状态脑功能连接与青少年认知的异质性分析

Brain functional connectivity or connectome, a unique measure for brain functional organization, provides a great potential to explain the neurobiological underpinning of behavioral profiles. Existing connectome-based analyses highly concentrate on brain activities under a single cognitive state, and fail to consider heterogeneity when attempting to characterize brain-to-behavior relationships. In this work, we study the complex impact of multi-state functional connectivity…

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Leveraging Weather Dynamics in Insurance Claims Triage Using Deep Learning

利用深度学习将天气动态纳入保险理赔分流

In property insurance claims triage, insurers often use static information to assess the severity of a claim and to identify the subsequent actions. We hypothesize that the pattern of weather conditions throughout the course of a loss event is predictive of the insured losses, and hence appropriate use of weather dynamics improves the operation of insurers’ claim management. To test this hypothesis, we propose a deep learning method to incorporate dynamic weather information…

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Estimating Cell-Type-Specific Gene Co-Expression Networks from Bulk Gene Expression Data with an Application to Alzheimer’s Disease

从整体基因表达数据估计细胞类型特异共表达网络

Inferring and characterizing gene co-expression networks has led to important insights on the molecular mechanisms of complex diseases. Most co-expression analyses to date have been performed on gene expression data collected from bulk tissues with different cell type compositions across samples. As a result, the co-expression estimates only offer an aggregated view of the underlying gene regulations and can be confounded by heterogeneity in cell type compositions, failing…

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