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Bayesian precision and covariance matrix estimation for graphical Gaussian models with edge and vertex symmetries

具有边与顶点对称性的高斯图模型精度及协方差矩阵贝叶斯估计

Graphical Gaussian models with edge and vertex symmetries were introduced by Højsgaard & Lauritzen (2008), who gave an algorithm for computing the maximum likelihood estimate of the precision matrix for such models. In this paper, we take a Bayesian approach to its estimation. We consider only models with symmetry constraints and which thus form a natural exponential family with the precision matrix as the canonical parameter. We identify the Diaconis–Ylvisaker conjugate…

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A non-model-based approach to bandwidth selection for kernel estimators of spatial intensity functions

空间强度函数核估计的非模型化带宽选择

We propose a new bandwidth selection method for kernel estimators of spatial point process intensity functions. The method is based on an optimality criterion motivated by the Campbell formula applied to the reciprocal intensity function. The new method is fully nonparametric, does not require knowledge of higher-order moments, and is not restricted to a specific class of point process. Our approach is computationally straightforward and does not require numerical…

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Joint testing and false discovery rate control in high-dimensional multivariate regression

高维多元回归中的联合检验与错误发现率控制

Multivariate regression with high-dimensional covariates has many applications in genomic and genetic research, in which some covariates are expected to be associated with multiple responses. This paper considers joint testing for regression coefficients over multiple responses and develops simultaneous testing methods with false discovery rate control. The test statistic is based on inverse regression and bias-corrected group lasso estimates of the regression coefficients…

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Convergence of regression-adjusted approximate Bayesian computation

回归调整近似贝叶斯计算的收敛性

We present asymptotic results for the regression-adjusted version of approximate Bayesian computation introduced by Beaumont et al. (2002). We show that for an appropriate choice of the bandwidth, regression adjustment will lead to a posterior that, asymptotically, correctly quantifies uncertainty. Furthermore, for such a choice of bandwidth we can implement an importance sampling algorithm to sample from the posterior whose acceptance probability tends to unity as the data…

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Testing independence for multivariate time series via the auto-distance correlation matrix

利用自距离相关矩阵检验多元时间序列的独立性

SUMMARYWe introduce the matrix multivariate auto-distance covariance and correlation functions for time series, discuss their interpretation and develop consistent estimators for practical implementation. We also develop a test of the independent and identically distributed hypothesis for multivariate time series data and show that it performs better than the multivariate Ljung–Box test. We discuss computational aspects and present a data example to illustrate the method.

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On the asymptotic efficiency of approximate Bayesian computation estimators

近似贝叶斯计算估计量的渐近效率

Many statistical applications involve models for which it is difficult to evaluate the likelihood, but from which it is relatively easy to sample. Approximate Bayesian computation is a likelihood-free method for implementing Bayesian inference in such cases. We present results on the asymptotic variance of estimators obtained using approximate Bayesian computation in a large data limit. Our key assumption is that the data are summarized by a fixed-dimensional summary…

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‘On the degrees of freedom of reduced-rank estimators in multivariate regression’

《多元回归中降秩估计量的自由度》证明缺陷说明

Biometrika (2015), 102, pp. 457–77 The argument given in the paper that Stein’s formula can be applied to the reduced-rank regression estimator is unfortunately incomplete. A full proof may be found in Hansen (2017). We thank Niels Richard Hansen for pointing out a deficiency in the proof in the paper.

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Dual regression

对偶回归

We propose dual regression as an alternative to quantile regression for the global estimation of conditional distribution functions. Dual regression provides the interpretational power of quantile regression while avoiding the need to repair intersecting conditional quantile surfaces. We introduce a mathematical programming characterization of conditional distribution functions which, in its simplest form, is the dual program of a simultaneous estimator for linear…

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Scalar-on-image regression via the soft-thresholded Gaussian process

基于软阈值高斯过程的标量对图像回归

This work concerns spatial variable selection for scalar-on-image regression. We propose a new class of Bayesian nonparametric models and develop an efficient posterior computational aigorithm. The proposed soft-thresholded Gaussian process provides large prior support over the class of piecewise-smooth, sparse, and continuous spatially-varying regression coefficient functions. In addition, under some mild regularity conditions the soft-thresholded Gaussian proess prior…

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Choosing between methods of combining $p$-values

如何选择合并 p 值的方法

Combining |$p$|-values from independent statistical tests is a popular approach to meta-analysis, particularly when the data underlying the tests are either no longer available or are difficult to combine. Numerous |$p$|-value combination methods appear in the literature, each with different statistical properties, yet often the final choice used in a meta-analysis can seem arbitrary, as if all effort has been expended in building the models that gave rise to the |$p$|-values…

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On bias reduction and incidental parameters

偏差减少与附带参数

Firth (1993) introduced a method for reducing the bias of the maximum likelihood estimator. Here it is shown that the approach is also effective in reducing the sensitivity of inferential procedures to incidental parameters.

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Shape-constrained partial identification of a population mean under unknown probabilities of sample selection

未知样本选择概率下总体均值的形状约束部分识别

Estimating a population mean from a sample obtained with unknown selection probabilities is important in the biomedical and social sciences. Using a ratio estimator, Aronow & Lee (2013) proposed a method for partial identification of the mean by allowing the unknown selection probabilities to vary arbitrarily between two fixed values. In this paper, we show how to use auxiliary shape constraints on the population outcome distribution, such as symmetry or log-concavity, to…

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Robust and consistent variable selection in high-dimensional generalized linear models

高维广义线性模型中的稳健一致变量选择

Generalized linear models are popular for modelling a large variety of data. We consider variable selection through penalized methods by focusing on resistance issues in the presence of outlying data and other deviations from assumptions. We highlight the weaknesses of widely-used penalized M-estimators, propose a robust penalized quasilikelihood estimator, and show that it enjoys oracle properties in high dimensions and is stable in a neighbourhood of the model. We…

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Approximate Bayesian inference under informative sampling

信息性抽样下的近似贝叶斯推断

Statistical inference with complex survey data is challenging because the sampling design can be informative, and ignoring it can produce misleading results. Current methods of Bayesian inference under complex sampling assume that the sampling design is noninformative for the specified model. In this paper, we propose a Bayesian approach which uses the sampling distribution of a summary statistic to derive the posterior distribution of the parameters of interest. Asymptotic…

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On causal estimation using $U$-statistics

基于 U 统计量的因果估计

We introduce a general class of causal estimands which extends the familiar notion of average treatment effect. The class is defined by a contrast function, prespecified to quantify the relative favourability of one outcome over another, averaged over the marginal distributions of two potential outcomes. Natural estimators arise in the form of |$U$|-statistics. We derive both a naive inverse propensity score weighted estimator and a class of locally efficient and doubly…

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A structural Markov property for decomposable graph laws that allows control of clique intersections

可控制团交集的可分解图分布结构马尔可夫性质

We present a new kind of structural Markov property for probabilistic laws on decomposable graphs, which allows the explicit control of interactions between cliques and so is capable of encoding some interesting structure. We prove the equivalence of this property to an exponential family assumption, and discuss identifiability, modelling, inferential and computational implications.

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Kernel-based covariate functional balancing for observational studies

观察性研究中基于核的协变量函数平衡

Covariate balance is often advocated for objective causal inference since it mimics randomization in observational data. Unlike methods that balance specific moments of covariates, our proposal attains uniform approximate balance for covariate functions in a reproducing-kernel Hilbert space. The corresponding infinite-dimensional optimization problem is shown to have a finite-dimensional representation in terms of an eigenvalue optimization problem. Large-sample results are…

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Testing for the presence of significant covariates through conditional marginal regression

通过条件边际回归检验遗漏协变量的显著性

Researchers sometimes have a priori information on the relative importance of predictors that can be used to screen out covariates. An important question is whether any of the discarded covariates have predictive power when the most relevant predictors are included in the model. We consider testing whether any discarded covariate is significant conditional on some pre-chosen covariates. We propose a maximum-type test statistic and show that it has a nonstandard asymptotic…

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Partial likelihood estimation of isotonic proportional hazards models

单调比例风险模型的偏似然估计

We consider the estimation of the semiparametric proportional hazards model with an unspecified baseline hazard function where the effect of a continuous covariate is assumed to be monotone. Previous work on nonparametric maximum likelihood estimation for isotonic proportional hazard regression with right-censored data is computationally intensive, lacks theoretical justification, and may be prohibitive in large samples. In this paper, partial likelihood estimation is…

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Simple least squares estimator for treatment effects using propensity score residuals

利用倾向得分残差估计处理效应的简单最小二乘方法

Propensity score matching is widely used to control covariates when analysing the effects of a nonrandomized binary treatment. However, it requires several arbitrary decisions, such as how many matched subjects to use and how to choose them. In this paper a simple least squares estimator is proposed, where the treatment, and possibly the response variable, is replaced by the propensity score residual. The proposed estimator controls covariates semiparametrically if the…

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A conditional composite likelihood ratio test with boundary constraints

边界约束下的条件复合似然比检验

Composite likelihood has been widely used in applications. The asymptotic distribution of the composite likelihood ratio statistic at the boundary of the parameter space is a complicated mixture of weighted |$\chi^2$| distributions. In this paper we propose a conditional test with data-dependent degrees of freedom. We consider a modification of the composite likelihood which satisfies the second-order Bartlett identity. We show that the modified composite likelihood ratio…

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A robust goodness-of-fit test for generalized autoregressive conditional heteroscedastic models

广义自回归条件异方差模型的稳健拟合优度检验

Estimation of time series models with heavy-tailed innovations has been widely discussed, but corresponding goodness-of-fit tests have attracted less attention, primarily because the autocorrelation function commonly used in constructing goodness-of-fit tests necessarily imposes 10 certain moment conditions on the innovations.As a bounded random variable has finite moments of all orders, we address the problem by first transforming the residuals with a bounded function.More…

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Two-sample tests of high-dimensional means for compositional data

高维组成数据均值的两样本检验

Compositional data are ubiquitous in many scientific endeavours. Motivated by microbiome and metagenomic research, we consider a two-sample testing problem for high-dimensional compositional data and formulate a testable hypothesis of compositional equivalence for the means of two latent log basis vectors. We propose a test through the centred log-ratio transformation of the compositions. The asymptotic null distribution of the test statistic is derived and its power against…

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A randomization-based perspective on analysis of variance: a test statistic robust to treatment effect heterogeneity

随机化视角下的方差分析:对处理效应异质性稳健的检验统计量

Fisher randomization tests for Neyman’s null hypothesis of no average treatment effect are considered in a finite-population setting associated with completely randomized experiments involving more than two treatments. The consequences of using the |$F$| statistic to conduct such a test are examined, and we argue that under treatment effect heterogeneity, use of the |$F$| statistic in the Fisher randomization test can severely inflate the Type I error under Neyman’s null…

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