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Data integration: exploiting ratios of parameter estimates from a reduced external model

数据整合:利用外部简化模型的参数估计比值

Summary We consider the situation of estimating the parameters in a generalized linear prediction model, from an internal dataset, where the outcome variable $Y$ is binary and there are two sets of covariates, $X$ and $Z$. We have information from an external study that provides parameter estimates for a generalized linear model of $Y$ on $X$. We propose a method that makes limited assumptions about the similarity of the distributions in the two study populations. The method…

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Testing generalized linear models with high-dimensional nuisance parameters

含高维干扰参数的广义线性模型检验

Summary Generalized linear models often have high-dimensional nuisance parameters, as seen in applications such as testing gene-environment interactions or gene-gene interactions. In these scenarios, it is essential to test the significance of a high-dimensional subvector of the model’s coefficients. Although some existing methods can tackle this problem, they often rely on the bootstrap to approximate the asymptotic distribution of the test statistic, and are thus…

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Spherical clustering in detection of groups of concomitant extremes

用于识别共同极端事件群组的球面聚类

Summary There is growing empirical evidence that spherical $k$-means clustering performs well at identifying groups of concomitant extremes in high dimensions, thereby leading to sparse models. We provide one of the first theoretical results supporting this approach, but also demonstrate some pitfalls. Furthermore, we show that an alternative cost function may be more appropriate for identifying concomitant extremes, and it results in a novel spherical $k$-principal-component…

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On F -modelling-based empirical Bayes estimation of variances

基于 F 建模的方差经验贝叶斯估计

Summary We consider the problem of empirical Bayes estimation of multiple variances when provided with sample variances. Assuming an arbitrary prior on the variances, we derive different versions of the Bayes estimators using different loss functions. For one particular loss function, the resulting Bayes estimator relies on the marginal cumulative distribution function of the sample variances only. When replacing it with the empirical distribution function, we obtain an…

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Optimal minimax random designs for weighted least squares estimators

加权最小二乘估计的最优极小极大随机设计

Summary This work studies an experimental design problem where the values of a predictor variable, denoted by $x$, are to be determined with the goal of estimating a function $m(x)$, which is observed with noise. A linear model is fitted to $m(x)$, but it is not assumed that the model is correctly specified. It follows that the quantity of interest is the best linear approximation of $m(x)$, which is denoted by $\ell(x)$. It is shown that in this framework the ordinary least…

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Regression of exchangeable relational arrays

可交换关系数组的回归

Summary Relational arrays represent measures of association between pairs of actors, often in varied contexts or over time. Trade flows between countries, financial transactions between individuals, contact frequencies between school children in classrooms and dynamic protein-protein interactions are all examples of relational arrays. Elements of a relational array are often modelled as a linear function of observable covariates. Uncertainty estimates for regression…

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Instrumental variable estimation of the marginal structural Cox model for time-varying treatments

时变处理边际结构Cox模型的工具变量估计

Summary Robins (1998) introduced marginal structural models, a general class of counterfactual models for the joint effects of time-varying treatments in complex longitudinal studies subject to time-varying confounding. Robins (1998) established the identification of marginal structural model parameters under a sequential randomization assumption, which rules out unmeasured confounding of treatment assignment over time. The marginal structural Cox model is one of the most…

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Scalable and accurate variational Bayes for high-dimensional binary regression models

高维二元回归中可扩展且准确的变分贝叶斯方法

Summary Modern methods for Bayesian regression beyond the Gaussian response setting are often computationally impractical or inaccurate in high dimensions. In fact, as discussed in recent literature, bypassing such a trade-off is still an open problem even in routine binary regression models, and there is limited theory on the quality of variational approximations in high-dimensional settings. To address this gap, we study the approximation accuracy of routinely used…

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Sensitivity analysis for unmeasured confounding in the estimation of marginal causal effects

边际因果效应估计中未测混杂的敏感性分析

Summary One of the main threats to the validity of causal effect estimates from observational data is the existence of unmeasured confounders. A plethora of methods has been proposed to quantify deviation from conditional exchangeability, which arises when confounding is not properly accounted for, with each method having its own set of limitations and underlying assumptions. Few methods both scale well with the increasing complexity of potential measured confounders and…

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Mean decrease accuracy for random forests: inconsistency, and a practical solution via the Sobol-MDA

随机森林的平均准确率下降:不一致性与 Sobol-MDA 解决方案

Summary Variable importance measures are the main tools used to analyse the black-box mechanisms of random forests. Although the mean decrease accuracy is widely accepted as the most efficient variable importance measure for random forests, little is known about its statistical properties. In fact, the definition of mean decrease accuracy varies across the main random forest software. In this article, our objective is to rigorously analyse the behaviour of the main mean…

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Particle filter efficiency under limited communication

有限通信下粒子滤波的效率

Summary Sequential Monte Carlo methods are typically not straightforward to implement on parallel architectures. This is because standard resampling schemes involve communication between all particles. The $$\alpha$$-sequential Monte Carlo method was proposed recently as a potential solution to this that limits communication between particles. This limited communication is controlled through a sequence of stochastic matrices known as $$\alpha$$ matrices. We study the…

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An approximate randomization test for the high-dimensional two-sample Behrens–Fisher problem under arbitrary covariances

任意协方差下高维两样本 Behrens–Fisher 问题的近似随机化检验

Summary This paper is concerned with the problem of comparing the population means of two groups of independent observations. An approximate randomization test procedure based on the test statistic of Chen & Qin (2010) is proposed. The asymptotic behaviour of the test statistic, as well as the randomized statistic, is studied under weak conditions. In our theoretical framework, observations are not assumed to be identically distributed even within groups. No condition on the…

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Fréchet sufficient dimension reduction for random objects

随机对象的 Fréchet 充分降维

Summary We consider Fréchet sufficient dimension reduction with responses being complex random objects in a metric space and high-dimensional Euclidean predictors. We propose a novel approach, called the weighted inverse regression ensemble method, for linear Fréchet sufficient dimension reduction. The method is further generalized as a new operator defined on reproducing kernel Hilbert spaces for nonlinear Fréchet sufficient dimension reduction. We provide theoretical…

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A proximal distance algorithm for likelihood-based sparse covariance estimation

基于似然的稀疏协方差估计:近端距离算法

Summary This paper addresses the task of estimating a covariance matrix under a patternless sparsity assumption. In contrast to existing approaches based on thresholding or shrinkage penalties, we propose a likelihood-based method that regularizes the distance from the covariance estimate to a symmetric sparsity set. This formulation avoids unwanted shrinkage induced by more common norm penalties, and enables optimization of the resulting nonconvex objective by solving a…

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High-dimensional linear regression via implicit regularization

通过隐式正则化进行高维线性回归

Summary Many statistical estimators for high-dimensional linear regression are $M$-estimators, formed through minimizing a data-dependent square loss function plus a regularizer. This work considers a new class of estimators implicitly defined through a discretized gradient dynamic system under overparameterization. We show that, under suitable restricted isometry conditions, overparameterization leads to implicit regularization: if we directly apply gradient descent to the…

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Efficient semiparametric estimation of network treatment effects under partial interference

部分干扰下网络处理效应的有效半参数估计

Summary Although many estimators for network treatment effects have been proposed, their optimality properties, in terms of semiparametric efficiency, have yet to be resolved. We present a simple yet flexible asymptotic framework for deriving the efficient influence function and the semiparametric efficiency lower bound for a family of network causal effects under partial interference. An important corollary of our results is that one existing estimator, that proposed by Liu…

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Average direct and indirect causal effects under interference

干扰下的平均直接与间接因果效应

Summary We propose a definition for the average indirect effect of a binary treatment in the potential outcomes model for causal inference under cross-unit interference. Our definition is analogous to the standard definition of the average direct effect and can be expressed without needing to compare outcomes across multiple randomized experiments. We show that the proposed indirect effect satisfies a decomposition theorem stating that in a Bernoulli trial, the sum of the…

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Decomposition, identification and multiply robust estimation of natural mediation effects with multiple mediators

多中介自然中介效应的分解、识别与多重稳健估计

Summary Natural mediation effects are desirable estimands for studying causal mechanisms in a population, but complications arise in defining and estimating natural indirect effects through multiple mediators with an unspecified causal ordering. We propose a decomposition of the natural indirect effect of multiple mediators into individual components, termed exit indirect effects, and a remainder interaction term, and study the similarities to and differences from existing…

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Functional hybrid factor regression model for handling heterogeneity in imaging studies

处理影像研究异质性的函数型混合因子回归模型

Summary This paper develops a functional hybrid factor regression modelling framework to handle the heterogeneity of many large-scale imaging studies, such as the Alzheimer’s disease neuroimaging initiative study. Despite the numerous successes of those imaging studies, such heterogeneity may be caused by the differences in study environment, population, design, protocols or other hidden factors, and it has posed major challenges in integrative analysis of imaging data…

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A correlation-shrinkage prior for Bayesian prediction of the two-dimensional Wishart model

二维Wishart模型贝叶斯预测的相关系数收缩先验

Summary A Bayesian prediction problem for the two-dimensional Wishart model is investigated within the framework of decision theory. The loss function is the Kullback–Leibler divergence. We construct a scale-invariant and permutation-invariant prior distribution that shrinks the correlation coefficient. The prior is the geometric mean of the right invariant prior with respect to permutation of the indices, and is characterized by a uniform distribution for Fisher’s $z$-transf…

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Distribution-on-distribution regression via optimal transport maps

通过最优传输映射进行分布对分布回归

Summary We present a framework for performing regression when both covariate and response are probability distributions on a compact interval. Our regression model is based on the theory of optimal transportation, and links the conditional Fréchet mean of the response to the covariate via an optimal transport map. We define a Fréchet-least-squares estimator of this regression map, and establish its consistency and rate of convergence to the true map, under both full and…

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Adjusting the Benjamini–Hochberg method for controlling the false discovery rate in knockoff-assisted variable selection

调整Benjamini–Hochberg方法以控制knockoff变量选择的错误发现率

Summary We consider the knockoff-based multiple testing set-up of Barber & Candès (2015). for variable selection in multiple regression. The method of Benjamini & Hochberg (1995) and an adaptive version of it are adjusted to this set-up, transforming them to valid $p$-value-based, false discovery rate-controlling methods that do not rely on specifying the correlation structure of the explanatory variables. Simulations and real data applications show that the proposed methods…

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A global stochastic optimization particle filter algorithm

用于全局随机优化的粒子滤波算法

Summary We introduce a new online algorithm for expected loglikelihood maximization in situations where the objective function is multimodal or has saddle points. The key element underpinning the algorithm is a probability distribution that concentrates on the target parameter value as the sample size increases and can be efficiently estimated by means of a standard particle filter algorithm. This distribution depends on a learning rate, such that the faster the learning…

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Graphical Gaussian process models for highly multivariate spatial data

高度多元空间数据的图结构高斯过程模型

Summary For multivariate spatial Gaussian process models, customary specifications of cross-covariance functions do not exploit relational inter-variable graphs to ensure process-level conditional independence between the variables. This is undesirable, especially in highly multivariate settings, where popular cross-covariance functions, such as multivariate Matérn functions, suffer from a curse of dimensionality as the numbers of parameters and floating-point operations…

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