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Estimating the false discovery rate of variable selection

变量选择的假发现率估计

We introduce a generic estimator for the false discovery rate of any model selection procedure, in common statistical modeling settings including the Gaussian linear model, Gaussian graphical model, and model-X setting. We prove that our method has a conservative (nonnegative) bias in finite samples under standard statistical assumptions, and provide a bootstrap method for assessing its standard error. For methods like the Lasso, forward-stepwise regression, and the…

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A flexible defense against the winner’s curse

灵活应对赢家诅咒的推断方法

Across science and policy, decision-makers often need to draw conclusions about the best candidate among competing alternatives. For instance, researchers may seek to infer the effectiveness of the most successful treatment or determine which demographic group benefits most from a specific treatment. Similarly, in machine learning, practitioners are often interested in the population performance of the model that performs best empirically. However, cherry-picking the best…

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Locally simultaneous inference

局部同时推断

Selective inference is the problem of giving valid answers to statistical questions chosen in a data-driven manner. A standard solution to selective inference is simultaneous inference, which delivers valid answers to the set of all questions that could possibly have been asked. However, simultaneous inference can be unnecessarily conservative if this set includes many questions that were unlikely to be asked in the first place. We introduce a less conservative solution to…

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The edge of discovery: Controlling the local false discovery rate at the margin

发现的边缘:控制拒绝边界上的局部错误发现率

Despite the popularity of the false discovery rate (FDR) as an error control metric for large-scale multiple testing, its close Bayesian counterpart the local false discovery rate (lfdr), defined as the posterior probability that a particular null hypothesis is false, is a more directly relevant standard for justifying and interpreting individual rejections. However, the lfdr is difficult to work with in small samples, as the prior distribution is typically unknown. We…

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Conditional calibration for false discovery rate control under dependence

依赖情形下控制错误发现率的条件校准

We introduce a new class of methods for finite-sample false discovery rate (FDR) control in multiple testing problems with dependent test statistics where the dependence is known. Our approach separately calibrates a data-dependent p-value rejection threshold for each hypothesis, relaxing or tightening the threshold as appropriate to target exact FDR control. In addition to our general framework, we propose a concrete algorithm, the dependence-adjusted Benjamini–Hochberg…

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A general interactive framework for false discovery rate control under structural constraints

结构约束下控制错误发现率的一般交互框架

Summary We propose a general framework based on selectively traversed accumulation rules for interactive multiple testing with generic structural constraints on the rejection set. It combines accumulation tests from ordered multiple testing with data-carving ideas from post-selection inference, allowing highly flexible adaptation to generic structural information. Our procedure defines an interactive protocol for gradually pruning a candidate rejection set, beginning with…

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AdaPT: An Interactive Procedure for Multiple Testing with Side Information

AdaPT:利用辅助信息的交互式多重检验程序

Summary We consider the problem of multiple-hypothesis testing with generic side information: for each hypothesis Hi we observe both a p-value pi and some predictor xi encoding contextual information about the hypothesis. For large-scale problems, adaptively focusing power on the more promising hypotheses (those more likely to yield discoveries) can lead to much more powerful multiple-testing procedures. We propose a general iterative framework for this problem, the adaptive…

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Semiparametric exponential families for heavy-tailed data

重尾数据的半参数指数族方法

We propose a semiparametric method for fitting the tail of a heavy-tailed population given a relatively small sample from that population and a larger sample from a related background population. We model the tail of the small sample as an exponential tilt of the better-observed large-sample tail, using a robust sufficient statistic motivated by extreme value theory. In particular, our method induces an estimator of the small-population mean, and we give theoretical and…

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Local case-control sampling: Efficient subsampling in imbalanced data sets

局部病例—对照抽样:类别不平衡数据的高效子抽样

For classification problems with significant class imbalance, subsampling can reduce computational costs at the price of inflated variance in estimating model parameters. We propose a method for subsampling efficiently for logistic regression by adjusting the class balance locally in feature space via an accept–reject scheme. Our method generalizes standard case-control sampling, using a pilot estimate to preferentially select examples whose responses are conditionally rare…

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Selection Adjusted Confidence Intervals With More Power to Determine the Sign

更有利于判定符号的选择调整置信区间

In many current large-scale problems, confidence intervals (CIs) are constructed only for the parameters that are large, as indicated by their estimators, ignoring the smaller parameters. Such selective inference poses a problem to the usual marginal CIs that no longer offer the right level of coverage, not even on the average over the selected parameters. We address this problem by developing three methods to construct short and valid CIs for the location parameter of a…

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